Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20475 and AO353_20480 are separated by 8 nucleotides AO353_20480 and AO353_20485 are separated by 3 nucleotides AO353_20485 and AO353_20490 are separated by 223 nucleotides AO353_20490 and AO353_20495 are separated by 134 nucleotides AO353_20495 and AO353_20500 are separated by 8 nucleotides
AO353_20475: AO353_20475 - N-hydroxyarylamine O-acetyltransferase, at 4,497,282 to 4,498,121
_20475
AO353_20480: AO353_20480 - hypothetical protein, at 4,498,130 to 4,498,510
_20480
AO353_20485: AO353_20485 - hypothetical protein, at 4,498,514 to 4,498,795
_20485
AO353_20490: AO353_20490 - uracil permease, at 4,499,019 to 4,500,539
_20490
AO353_20495: AO353_20495 - NUDIX hydrolase, at 4,500,674 to 4,501,186
_20495
AO353_20500: AO353_20500 - ADP-ribose pyrophosphatase, at 4,501,195 to 4,501,902
_20500
Position (kb)
4499
4500
4501 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4498.351 kb on + strand, within AO353_20480 at 4498.351 kb on + strand, within AO353_20480 at 4498.352 kb on - strand, within AO353_20480 at 4498.352 kb on - strand, within AO353_20480 at 4498.352 kb on - strand, within AO353_20480 at 4498.352 kb on - strand, within AO353_20480 at 4498.352 kb on - strand, within AO353_20480 at 4498.352 kb on - strand, within AO353_20480 at 4498.352 kb on - strand, within AO353_20480 at 4498.352 kb on - strand, within AO353_20480 at 4498.412 kb on + strand, within AO353_20480 at 4498.413 kb on - strand, within AO353_20480 at 4498.413 kb on - strand, within AO353_20480 at 4498.456 kb on + strand, within AO353_20480 at 4498.456 kb on + strand, within AO353_20480 at 4498.497 kb on + strand at 4498.498 kb on - strand at 4498.498 kb on - strand at 4498.593 kb on + strand, within AO353_20485 at 4498.594 kb on - strand, within AO353_20485 at 4498.594 kb on - strand, within AO353_20485 at 4498.599 kb on + strand, within AO353_20485 at 4498.599 kb on + strand, within AO353_20485 at 4498.599 kb on + strand, within AO353_20485 at 4498.599 kb on + strand, within AO353_20485 at 4498.599 kb on + strand, within AO353_20485 at 4498.599 kb on + strand, within AO353_20485 at 4498.600 kb on - strand, within AO353_20485 at 4498.600 kb on - strand, within AO353_20485 at 4498.600 kb on - strand, within AO353_20485 at 4498.600 kb on - strand, within AO353_20485 at 4498.600 kb on - strand, within AO353_20485 at 4498.634 kb on - strand, within AO353_20485 at 4498.698 kb on + strand, within AO353_20485 at 4498.698 kb on + strand, within AO353_20485 at 4498.698 kb on + strand, within AO353_20485 at 4498.699 kb on - strand, within AO353_20485 at 4498.763 kb on + strand, within AO353_20485 at 4498.764 kb on - strand, within AO353_20485 at 4498.773 kb on + strand at 4498.807 kb on + strand at 4498.807 kb on + strand at 4498.807 kb on + strand at 4498.808 kb on - strand at 4498.808 kb on - strand at 4498.810 kb on - strand at 4498.810 kb on - strand at 4498.810 kb on - strand at 4498.813 kb on + strand at 4498.814 kb on - strand at 4498.863 kb on + strand at 4498.863 kb on + strand at 4498.896 kb on + strand at 4498.896 kb on + strand at 4498.896 kb on + strand at 4498.896 kb on + strand at 4498.897 kb on - strand at 4498.897 kb on - strand at 4498.897 kb on - strand at 4498.897 kb on - strand at 4498.897 kb on - strand at 4498.897 kb on - strand at 4498.945 kb on + strand at 4499.081 kb on + strand at 4499.089 kb on - strand at 4499.116 kb on - strand at 4499.116 kb on - strand at 4499.116 kb on - strand at 4499.116 kb on - strand at 4499.116 kb on - strand at 4499.116 kb on - strand at 4499.116 kb on - strand at 4499.116 kb on - strand at 4499.116 kb on - strand at 4499.116 kb on - strand at 4499.116 kb on - strand at 4499.116 kb on - strand at 4499.134 kb on + strand at 4499.135 kb on - strand at 4499.417 kb on + strand, within AO353_20490 at 4499.417 kb on + strand, within AO353_20490 at 4499.417 kb on + strand, within AO353_20490 at 4499.418 kb on - strand, within AO353_20490 at 4500.125 kb on + strand, within AO353_20490 at 4500.125 kb on + strand, within AO353_20490 at 4500.125 kb on + strand, within AO353_20490 at 4500.125 kb on + strand, within AO353_20490 at 4500.126 kb on - strand, within AO353_20490 at 4500.127 kb on + strand, within AO353_20490 at 4500.127 kb on + strand, within AO353_20490 at 4500.127 kb on + strand, within AO353_20490 at 4500.127 kb on + strand, within AO353_20490 at 4500.127 kb on + strand, within AO353_20490 at 4500.127 kb on + strand, within AO353_20490 at 4500.127 kb on + strand, within AO353_20490 at 4500.127 kb on + strand, within AO353_20490 at 4500.127 kb on + strand, within AO353_20490 at 4500.127 kb on + strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.128 kb on - strand, within AO353_20490 at 4500.131 kb on + strand, within AO353_20490 at 4500.131 kb on + strand, within AO353_20490 at 4500.131 kb on + strand, within AO353_20490 at 4500.131 kb on + strand, within AO353_20490 at 4500.131 kb on + strand, within AO353_20490 at 4500.131 kb on + strand, within AO353_20490 at 4500.131 kb on + strand, within AO353_20490 at 4500.132 kb on - strand, within AO353_20490 at 4500.132 kb on - strand, within AO353_20490 at 4500.132 kb on - strand, within AO353_20490 at 4500.132 kb on - strand, within AO353_20490 at 4500.132 kb on - strand, within AO353_20490 at 4500.132 kb on - strand, within AO353_20490 at 4500.228 kb on + strand, within AO353_20490 at 4500.228 kb on + strand, within AO353_20490 at 4500.228 kb on + strand, within AO353_20490 at 4500.228 kb on + strand, within AO353_20490 at 4500.229 kb on - strand, within AO353_20490 at 4500.229 kb on - strand, within AO353_20490 at 4500.229 kb on - strand, within AO353_20490 at 4500.229 kb on - strand, within AO353_20490 at 4500.420 kb on + strand at 4500.420 kb on + strand at 4500.420 kb on + strand at 4500.420 kb on + strand at 4500.420 kb on + strand at 4500.420 kb on + strand at 4500.420 kb on + strand at 4500.421 kb on - strand at 4500.421 kb on - strand at 4500.829 kb on + strand, within AO353_20495 at 4500.830 kb on - strand, within AO353_20495 at 4500.830 kb on - strand, within AO353_20495 at 4500.837 kb on + strand, within AO353_20495 at 4500.837 kb on + strand, within AO353_20495 at 4501.143 kb on + strand at 4501.144 kb on - strand at 4501.144 kb on - strand at 4501.196 kb on + strand at 4501.196 kb on + strand at 4501.197 kb on - strand at 4501.197 kb on - strand at 4501.197 kb on - strand at 4501.197 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,498,351 + AO353_20480 0.58 +0.0 4,498,351 + AO353_20480 0.58 +0.1 4,498,352 - AO353_20480 0.58 +1.0 4,498,352 - AO353_20480 0.58 +1.0 4,498,352 - AO353_20480 0.58 +1.2 4,498,352 - AO353_20480 0.58 -0.5 4,498,352 - AO353_20480 0.58 +1.6 4,498,352 - AO353_20480 0.58 -0.4 4,498,352 - AO353_20480 0.58 -0.8 4,498,352 - AO353_20480 0.58 +1.8 4,498,412 + AO353_20480 0.74 -1.7 4,498,413 - AO353_20480 0.74 -1.1 4,498,413 - AO353_20480 0.74 -0.9 4,498,456 + AO353_20480 0.86 -0.6 4,498,456 + AO353_20480 0.86 +0.2 4,498,497 + +1.0 4,498,498 - -0.5 4,498,498 - +0.2 4,498,593 + AO353_20485 0.28 +0.3 4,498,594 - AO353_20485 0.28 -0.5 4,498,594 - AO353_20485 0.28 +0.8 4,498,599 + AO353_20485 0.30 -0.5 4,498,599 + AO353_20485 0.30 +1.3 4,498,599 + AO353_20485 0.30 -0.2 4,498,599 + AO353_20485 0.30 +1.6 4,498,599 + AO353_20485 0.30 -0.4 4,498,599 + AO353_20485 0.30 -0.2 4,498,600 - AO353_20485 0.30 -0.1 4,498,600 - AO353_20485 0.30 +0.3 4,498,600 - AO353_20485 0.30 -1.2 4,498,600 - AO353_20485 0.30 +0.0 4,498,600 - AO353_20485 0.30 +0.9 4,498,634 - AO353_20485 0.43 +0.6 4,498,698 + AO353_20485 0.65 +0.3 4,498,698 + AO353_20485 0.65 +0.4 4,498,698 + AO353_20485 0.65 +1.0 4,498,699 - AO353_20485 0.66 +1.1 4,498,763 + AO353_20485 0.88 -1.0 4,498,764 - AO353_20485 0.89 +0.3 4,498,773 + -1.3 4,498,807 + +0.0 4,498,807 + -0.1 4,498,807 + -0.4 4,498,808 - -1.0 4,498,808 - -1.5 4,498,810 - +0.6 4,498,810 - +0.8 4,498,810 - -1.0 4,498,813 + +0.2 4,498,814 - +0.5 4,498,863 + +0.1 4,498,863 + -3.0 4,498,896 + +0.4 4,498,896 + +0.6 4,498,896 + -0.3 4,498,896 + -0.0 4,498,897 - -1.3 4,498,897 - +0.2 4,498,897 - +1.5 4,498,897 - +0.2 4,498,897 - -0.4 4,498,897 - +0.7 4,498,945 + -0.6 4,499,081 + -0.1 4,499,089 - +1.5 4,499,116 - -0.4 4,499,116 - -0.4 4,499,116 - -0.2 4,499,116 - +1.2 4,499,116 - +0.0 4,499,116 - -0.4 4,499,116 - -0.2 4,499,116 - +0.3 4,499,116 - -0.5 4,499,116 - +0.8 4,499,116 - +0.6 4,499,116 - +2.4 4,499,134 + +0.3 4,499,135 - +1.0 4,499,417 + AO353_20490 0.26 -0.4 4,499,417 + AO353_20490 0.26 +0.0 4,499,417 + AO353_20490 0.26 +0.6 4,499,418 - AO353_20490 0.26 -0.4 4,500,125 + AO353_20490 0.73 -1.3 4,500,125 + AO353_20490 0.73 +1.4 4,500,125 + AO353_20490 0.73 +0.0 4,500,125 + AO353_20490 0.73 -1.5 4,500,126 - AO353_20490 0.73 +0.0 4,500,127 + AO353_20490 0.73 +1.0 4,500,127 + AO353_20490 0.73 -1.0 4,500,127 + AO353_20490 0.73 -0.3 4,500,127 + AO353_20490 0.73 -1.5 4,500,127 + AO353_20490 0.73 -2.0 4,500,127 + AO353_20490 0.73 +1.5 4,500,127 + AO353_20490 0.73 -0.9 4,500,127 + AO353_20490 0.73 +0.4 4,500,127 + AO353_20490 0.73 -0.0 4,500,127 + AO353_20490 0.73 +0.5 4,500,128 - AO353_20490 0.73 +0.5 4,500,128 - AO353_20490 0.73 -0.5 4,500,128 - AO353_20490 0.73 +1.5 4,500,128 - AO353_20490 0.73 -1.3 4,500,128 - AO353_20490 0.73 -0.5 4,500,128 - AO353_20490 0.73 -1.1 4,500,128 - AO353_20490 0.73 -0.4 4,500,128 - AO353_20490 0.73 -1.3 4,500,128 - AO353_20490 0.73 -0.2 4,500,128 - AO353_20490 0.73 -1.5 4,500,128 - AO353_20490 0.73 +1.0 4,500,128 - AO353_20490 0.73 -0.4 4,500,128 - AO353_20490 0.73 -0.6 4,500,128 - AO353_20490 0.73 +0.6 4,500,128 - AO353_20490 0.73 -1.8 4,500,128 - AO353_20490 0.73 +0.6 4,500,131 + AO353_20490 0.73 +0.0 4,500,131 + AO353_20490 0.73 +0.0 4,500,131 + AO353_20490 0.73 +0.5 4,500,131 + AO353_20490 0.73 -1.4 4,500,131 + AO353_20490 0.73 -1.3 4,500,131 + AO353_20490 0.73 +0.5 4,500,131 + AO353_20490 0.73 +0.0 4,500,132 - AO353_20490 0.73 +0.3 4,500,132 - AO353_20490 0.73 -0.5 4,500,132 - AO353_20490 0.73 +0.0 4,500,132 - AO353_20490 0.73 +0.5 4,500,132 - AO353_20490 0.73 +0.9 4,500,132 - AO353_20490 0.73 +0.3 4,500,228 + AO353_20490 0.79 +0.8 4,500,228 + AO353_20490 0.79 +1.0 4,500,228 + AO353_20490 0.79 -1.0 4,500,228 + AO353_20490 0.79 +0.8 4,500,229 - AO353_20490 0.80 +2.3 4,500,229 - AO353_20490 0.80 +0.7 4,500,229 - AO353_20490 0.80 -0.5 4,500,229 - AO353_20490 0.80 -0.0 4,500,420 + -0.2 4,500,420 + +0.0 4,500,420 + -2.0 4,500,420 + -0.1 4,500,420 + -0.3 4,500,420 + +0.5 4,500,420 + +0.6 4,500,421 - +1.5 4,500,421 - +1.0 4,500,829 + AO353_20495 0.30 +0.0 4,500,830 - AO353_20495 0.30 +0.2 4,500,830 - AO353_20495 0.30 -1.1 4,500,837 + AO353_20495 0.32 +1.6 4,500,837 + AO353_20495 0.32 +0.0 4,501,143 + -0.4 4,501,144 - +2.6 4,501,144 - +0.0 4,501,196 + +0.3 4,501,196 + -2.8 4,501,197 - +0.0 4,501,197 - -0.2 4,501,197 - -0.8 4,501,197 - -0.2
Or see this region's nucleotide sequence