Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03095 and AO353_03100 are separated by 94 nucleotides AO353_03100 and AO353_03105 are separated by 30 nucleotides AO353_03105 and AO353_03110 are separated by 83 nucleotides AO353_03110 and AO353_03115 are separated by 202 nucleotides AO353_03115 and AO353_03120 are separated by 163 nucleotides
AO353_03095: AO353_03095 - hypothetical protein, at 664,312 to 665,271
_03095
AO353_03100: AO353_03100 - XRE family transcriptional regulator, at 665,366 to 665,683
_03100
AO353_03105: AO353_03105 - XRE family transcriptional regulator, at 665,714 to 666,034
_03105
AO353_03110: AO353_03110 - hydrolase, at 666,118 to 667,173
_03110
AO353_03115: AO353_03115 - TetR family transcriptional regulator, at 667,376 to 667,990
_03115
AO353_03120: AO353_03120 - hypothetical protein, at 668,154 to 668,693
_03120
Position (kb) 666
667
668 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 665.125 kb on + strand, within AO353_03095 at 665.125 kb on + strand, within AO353_03095 at 665.125 kb on + strand, within AO353_03095 at 665.125 kb on + strand, within AO353_03095 at 665.125 kb on + strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.238 kb on + strand at 665.238 kb on + strand at 665.238 kb on + strand at 665.269 kb on + strand at 665.269 kb on + strand at 665.270 kb on - strand at 665.270 kb on - strand at 665.270 kb on - strand at 665.270 kb on - strand at 665.270 kb on - strand at 665.340 kb on - strand at 665.340 kb on - strand at 665.495 kb on - strand, within AO353_03100 at 665.565 kb on - strand, within AO353_03100 at 665.639 kb on - strand, within AO353_03100 at 665.697 kb on - strand at 665.698 kb on + strand at 665.699 kb on - strand at 665.699 kb on - strand at 665.709 kb on + strand at 665.709 kb on + strand at 665.710 kb on - strand at 665.710 kb on - strand at 665.744 kb on - strand at 665.748 kb on - strand, within AO353_03105 at 665.748 kb on - strand, within AO353_03105 at 665.748 kb on - strand, within AO353_03105 at 665.748 kb on - strand, within AO353_03105 at 665.748 kb on - strand, within AO353_03105 at 665.757 kb on + strand, within AO353_03105 at 665.757 kb on + strand, within AO353_03105 at 665.757 kb on + strand, within AO353_03105 at 665.788 kb on + strand, within AO353_03105 at 665.789 kb on - strand, within AO353_03105 at 665.789 kb on - strand, within AO353_03105 at 665.823 kb on + strand, within AO353_03105 at 665.823 kb on + strand, within AO353_03105 at 665.823 kb on + strand, within AO353_03105 at 665.824 kb on - strand, within AO353_03105 at 665.824 kb on - strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 666.035 kb on + strand at 666.074 kb on + strand at 666.075 kb on - strand at 666.105 kb on + strand at 666.106 kb on - strand at 666.106 kb on - strand at 666.106 kb on - strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.119 kb on + strand at 666.120 kb on - strand at 666.120 kb on - strand at 666.120 kb on - strand at 666.123 kb on + strand at 666.123 kb on + strand at 666.123 kb on + strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.404 kb on + strand, within AO353_03110 at 666.405 kb on - strand, within AO353_03110 at 666.405 kb on - strand, within AO353_03110 at 666.477 kb on - strand, within AO353_03110 at 666.762 kb on - strand, within AO353_03110 at 666.943 kb on + strand, within AO353_03110 at 666.943 kb on + strand, within AO353_03110 at 666.943 kb on + strand, within AO353_03110 at 666.943 kb on + strand, within AO353_03110 at 666.944 kb on - strand, within AO353_03110 at 666.944 kb on - strand, within AO353_03110 at 666.944 kb on - strand, within AO353_03110 at 666.944 kb on - strand, within AO353_03110 at 666.944 kb on - strand, within AO353_03110 at 666.999 kb on + strand, within AO353_03110 at 666.999 kb on + strand, within AO353_03110 at 667.000 kb on - strand, within AO353_03110 at 667.000 kb on - strand, within AO353_03110 at 667.020 kb on + strand, within AO353_03110 at 667.104 kb on - strand at 667.104 kb on - strand at 667.147 kb on - strand at 667.157 kb on + strand at 667.157 kb on + strand at 667.158 kb on - strand at 667.177 kb on + strand at 667.177 kb on + strand at 667.177 kb on + strand at 667.177 kb on + strand at 667.177 kb on + strand at 667.177 kb on + strand at 667.177 kb on + strand at 667.177 kb on + strand at 667.178 kb on - strand at 667.178 kb on - strand at 667.178 kb on - strand at 667.178 kb on - strand at 667.228 kb on - strand at 667.264 kb on + strand at 667.283 kb on + strand at 667.283 kb on + strand at 667.283 kb on + strand at 667.297 kb on + strand at 667.298 kb on - strand at 667.344 kb on + strand at 667.345 kb on - strand at 667.345 kb on - strand at 667.371 kb on + strand at 667.372 kb on - strand at 667.375 kb on + strand at 667.375 kb on + strand at 667.375 kb on + strand at 667.375 kb on + strand at 667.375 kb on + strand at 667.375 kb on + strand at 667.376 kb on - strand at 667.376 kb on - strand at 667.376 kb on - strand at 667.376 kb on - strand at 667.376 kb on - strand at 667.406 kb on - strand at 667.517 kb on + strand, within AO353_03115 at 667.517 kb on + strand, within AO353_03115 at 667.518 kb on - strand, within AO353_03115 at 667.518 kb on - strand, within AO353_03115 at 667.518 kb on - strand, within AO353_03115 at 667.827 kb on + strand, within AO353_03115 at 667.828 kb on - strand, within AO353_03115 at 667.828 kb on - strand, within AO353_03115 at 667.941 kb on + strand at 667.941 kb on + strand at 667.941 kb on + strand at 667.941 kb on + strand at 667.942 kb on - strand at 667.942 kb on - strand at 667.942 kb on - strand at 667.942 kb on - strand at 667.942 kb on - strand at 667.973 kb on + strand at 667.973 kb on + strand at 667.974 kb on - strand at 667.974 kb on - strand at 667.974 kb on - strand at 668.026 kb on + strand at 668.026 kb on + strand at 668.026 kb on + strand at 668.027 kb on - strand at 668.027 kb on - strand at 668.039 kb on - strand at 668.062 kb on + strand at 668.062 kb on + strand at 668.062 kb on + strand at 668.062 kb on + strand at 668.070 kb on + strand at 668.071 kb on - strand at 668.115 kb on + strand at 668.115 kb on + strand at 668.116 kb on - strand at 668.116 kb on - strand at 668.116 kb on - strand at 668.117 kb on + strand at 668.117 kb on + strand at 668.117 kb on + strand at 668.117 kb on + strand at 668.117 kb on + strand at 668.117 kb on + strand at 668.117 kb on + strand at 668.117 kb on + strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand at 668.118 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 665,125 + AO353_03095 0.85 -1.2 665,125 + AO353_03095 0.85 +0.6 665,125 + AO353_03095 0.85 +0.0 665,125 + AO353_03095 0.85 +0.3 665,125 + AO353_03095 0.85 -2.2 665,126 - AO353_03095 0.85 -0.5 665,126 - AO353_03095 0.85 -0.9 665,126 - AO353_03095 0.85 -0.6 665,126 - AO353_03095 0.85 +0.3 665,126 - AO353_03095 0.85 -0.2 665,126 - AO353_03095 0.85 +0.1 665,137 + AO353_03095 0.86 -0.1 665,137 + AO353_03095 0.86 -0.2 665,137 + AO353_03095 0.86 -0.9 665,137 + AO353_03095 0.86 -0.1 665,137 + AO353_03095 0.86 -0.3 665,137 + AO353_03095 0.86 -0.0 665,137 + AO353_03095 0.86 +0.0 665,137 + AO353_03095 0.86 +0.6 665,137 + AO353_03095 0.86 -1.1 665,137 + AO353_03095 0.86 -0.9 665,137 + AO353_03095 0.86 -0.3 665,137 + AO353_03095 0.86 -0.7 665,138 - AO353_03095 0.86 +0.3 665,138 - AO353_03095 0.86 +0.5 665,138 - AO353_03095 0.86 -0.2 665,138 - AO353_03095 0.86 -0.5 665,138 - AO353_03095 0.86 -0.7 665,138 - AO353_03095 0.86 -1.3 665,238 + -0.1 665,238 + -1.2 665,238 + +0.8 665,269 + +0.3 665,269 + -0.5 665,270 - +0.7 665,270 - -0.7 665,270 - -0.6 665,270 - +0.3 665,270 - -1.2 665,340 - +2.3 665,340 - +0.7 665,495 - AO353_03100 0.41 -0.7 665,565 - AO353_03100 0.63 +0.4 665,639 - AO353_03100 0.86 -0.6 665,697 - -0.1 665,698 + +0.4 665,699 - +0.5 665,699 - -0.4 665,709 + -0.0 665,709 + -0.2 665,710 - +0.4 665,710 - -0.2 665,744 - -0.1 665,748 - AO353_03105 0.11 +1.8 665,748 - AO353_03105 0.11 -1.2 665,748 - AO353_03105 0.11 -0.7 665,748 - AO353_03105 0.11 -0.3 665,748 - AO353_03105 0.11 +1.2 665,757 + AO353_03105 0.13 +0.5 665,757 + AO353_03105 0.13 -0.2 665,757 + AO353_03105 0.13 -0.2 665,788 + AO353_03105 0.23 -0.1 665,789 - AO353_03105 0.23 +0.4 665,789 - AO353_03105 0.23 -0.4 665,823 + AO353_03105 0.34 +1.3 665,823 + AO353_03105 0.34 +1.0 665,823 + AO353_03105 0.34 -0.1 665,824 - AO353_03105 0.34 -2.2 665,824 - AO353_03105 0.34 +0.5 665,967 + AO353_03105 0.79 +2.0 665,967 + AO353_03105 0.79 -0.9 665,967 + AO353_03105 0.79 +0.8 665,967 + AO353_03105 0.79 +0.1 665,967 + AO353_03105 0.79 +0.1 665,967 + AO353_03105 0.79 +1.0 665,968 - AO353_03105 0.79 +0.9 665,968 - AO353_03105 0.79 +0.9 665,968 - AO353_03105 0.79 +0.7 665,968 - AO353_03105 0.79 +0.5 665,968 - AO353_03105 0.79 -0.6 665,968 - AO353_03105 0.79 -1.6 665,968 - AO353_03105 0.79 -0.2 666,035 + +0.0 666,074 + -0.7 666,075 - -2.3 666,105 + -0.4 666,106 - +1.0 666,106 - +1.3 666,106 - -0.1 666,111 + +1.3 666,111 + +0.8 666,111 + -0.4 666,111 + +0.2 666,111 + +0.5 666,111 + +0.4 666,111 + -1.1 666,111 + +0.3 666,111 + -0.3 666,111 + -0.1 666,112 - +0.0 666,112 - -0.6 666,112 - +0.3 666,112 - +0.3 666,112 - -0.1 666,112 - -1.6 666,112 - -1.3 666,112 - +1.3 666,112 - +0.2 666,112 - +0.7 666,112 - +0.0 666,119 + +0.3 666,120 - -0.6 666,120 - +1.0 666,120 - -0.2 666,123 + +0.8 666,123 + -2.1 666,123 + +0.2 666,124 - -0.5 666,124 - +0.6 666,124 - -0.1 666,124 - -1.3 666,124 - -0.3 666,124 - +1.3 666,124 - -0.1 666,404 + AO353_03110 0.27 -1.2 666,405 - AO353_03110 0.27 +0.7 666,405 - AO353_03110 0.27 +0.4 666,477 - AO353_03110 0.34 +1.3 666,762 - AO353_03110 0.61 +1.1 666,943 + AO353_03110 0.78 -0.7 666,943 + AO353_03110 0.78 -0.4 666,943 + AO353_03110 0.78 +0.7 666,943 + AO353_03110 0.78 +0.5 666,944 - AO353_03110 0.78 +1.2 666,944 - AO353_03110 0.78 -0.5 666,944 - AO353_03110 0.78 +1.3 666,944 - AO353_03110 0.78 +0.9 666,944 - AO353_03110 0.78 +0.9 666,999 + AO353_03110 0.83 -0.6 666,999 + AO353_03110 0.83 -0.4 667,000 - AO353_03110 0.84 -0.3 667,000 - AO353_03110 0.84 -0.3 667,020 + AO353_03110 0.85 +0.0 667,104 - -0.2 667,104 - +0.3 667,147 - +1.4 667,157 + +0.5 667,157 + -0.2 667,158 - -0.2 667,177 + +1.4 667,177 + -0.4 667,177 + -0.1 667,177 + +1.8 667,177 + +0.9 667,177 + -0.6 667,177 + +0.3 667,177 + -1.3 667,178 - +0.5 667,178 - +0.1 667,178 - -0.7 667,178 - +0.3 667,228 - -0.9 667,264 + +1.0 667,283 + -0.4 667,283 + +0.4 667,283 + -0.0 667,297 + +0.7 667,298 - -0.7 667,344 + -0.3 667,345 - -0.5 667,345 - +0.1 667,371 + +0.8 667,372 - -0.3 667,375 + +1.0 667,375 + +0.7 667,375 + -1.6 667,375 + -0.7 667,375 + +0.4 667,375 + -0.4 667,376 - -0.3 667,376 - -0.9 667,376 - +0.7 667,376 - -1.3 667,376 - -1.2 667,406 - -0.4 667,517 + AO353_03115 0.23 -0.7 667,517 + AO353_03115 0.23 -1.0 667,518 - AO353_03115 0.23 +0.7 667,518 - AO353_03115 0.23 +0.0 667,518 - AO353_03115 0.23 -1.2 667,827 + AO353_03115 0.73 -0.7 667,828 - AO353_03115 0.73 +0.3 667,828 - AO353_03115 0.73 -0.3 667,941 + -1.3 667,941 + -0.7 667,941 + -0.1 667,941 + -0.3 667,942 - -0.3 667,942 - -0.6 667,942 - +0.1 667,942 - +0.0 667,942 - +2.3 667,973 + -0.0 667,973 + -1.0 667,974 - +3.3 667,974 - -0.1 667,974 - +0.3 668,026 + +1.3 668,026 + -1.1 668,026 + -1.1 668,027 - +0.8 668,027 - +0.4 668,039 - -0.3 668,062 + -0.0 668,062 + -0.3 668,062 + -0.3 668,062 + +0.0 668,070 + -0.4 668,071 - -0.5 668,115 + -0.7 668,115 + -0.0 668,116 - -1.1 668,116 - -1.0 668,116 - -0.5 668,117 + +0.0 668,117 + -0.1 668,117 + -0.6 668,117 + +0.8 668,117 + +0.4 668,117 + -1.1 668,117 + +1.8 668,117 + +1.2 668,118 - +0.3 668,118 - -0.8 668,118 - -0.3 668,118 - +1.8 668,118 - -0.4 668,118 - +0.3 668,118 - -0.3 668,118 - +0.9 668,118 - +0.7 668,118 - +0.2 668,118 - -0.6 668,118 - +1.6 668,118 - -1.1 668,118 - +0.2
Or see this region's nucleotide sequence