Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00940 and AO353_00945 are separated by 125 nucleotides AO353_00945 and AO353_00950 are separated by 81 nucleotides
AO353_00940: AO353_00940 - LysR family transcriptional regulator, at 213,800 to 214,723
_00940
AO353_00945: AO353_00945 - oxidoreductase, at 214,849 to 215,595
_00945
AO353_00950: AO353_00950 - HAD family hydrolase, at 215,677 to 216,369
_00950
Position (kb) 214
215
216 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 213.903 kb on + strand, within AO353_00940 at 213.903 kb on + strand, within AO353_00940 at 213.904 kb on - strand, within AO353_00940 at 213.904 kb on - strand, within AO353_00940 at 213.904 kb on - strand, within AO353_00940 at 213.904 kb on - strand, within AO353_00940 at 213.904 kb on - strand, within AO353_00940 at 213.904 kb on - strand, within AO353_00940 at 213.906 kb on + strand, within AO353_00940 at 213.906 kb on + strand, within AO353_00940 at 213.906 kb on + strand, within AO353_00940 at 213.906 kb on + strand, within AO353_00940 at 213.906 kb on + strand, within AO353_00940 at 213.906 kb on + strand, within AO353_00940 at 213.906 kb on + strand, within AO353_00940 at 213.907 kb on - strand, within AO353_00940 at 213.907 kb on - strand, within AO353_00940 at 213.907 kb on - strand, within AO353_00940 at 213.907 kb on - strand, within AO353_00940 at 213.907 kb on - strand, within AO353_00940 at 213.907 kb on - strand, within AO353_00940 at 213.907 kb on - strand, within AO353_00940 at 213.907 kb on - strand, within AO353_00940 at 213.907 kb on - strand, within AO353_00940 at 213.933 kb on + strand, within AO353_00940 at 213.933 kb on + strand, within AO353_00940 at 213.934 kb on - strand, within AO353_00940 at 213.934 kb on - strand, within AO353_00940 at 213.934 kb on - strand, within AO353_00940 at 214.172 kb on + strand, within AO353_00940 at 214.172 kb on + strand, within AO353_00940 at 214.173 kb on - strand, within AO353_00940 at 214.173 kb on - strand, within AO353_00940 at 214.173 kb on - strand, within AO353_00940 at 214.173 kb on - strand, within AO353_00940 at 214.173 kb on - strand, within AO353_00940 at 214.173 kb on - strand, within AO353_00940 at 214.173 kb on - strand, within AO353_00940 at 214.173 kb on - strand, within AO353_00940 at 214.213 kb on - strand, within AO353_00940 at 214.407 kb on + strand, within AO353_00940 at 214.407 kb on + strand, within AO353_00940 at 214.407 kb on + strand, within AO353_00940 at 214.407 kb on + strand, within AO353_00940 at 214.407 kb on + strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.408 kb on - strand, within AO353_00940 at 214.733 kb on + strand at 214.734 kb on - strand at 214.734 kb on - strand at 214.734 kb on - strand at 214.736 kb on - strand at 214.757 kb on + strand at 214.757 kb on + strand at 214.758 kb on - strand at 214.758 kb on - strand at 214.758 kb on - strand at 214.759 kb on + strand at 214.760 kb on - strand at 214.773 kb on + strand at 214.773 kb on + strand at 214.774 kb on - strand at 214.774 kb on - strand at 214.774 kb on - strand at 214.774 kb on - strand at 214.774 kb on - strand at 214.774 kb on - strand at 214.799 kb on - strand at 214.799 kb on - strand at 214.799 kb on - strand at 214.799 kb on - strand at 214.801 kb on + strand at 214.801 kb on + strand at 214.802 kb on - strand at 214.802 kb on - strand at 214.802 kb on - strand at 214.802 kb on - strand at 214.844 kb on + strand at 214.844 kb on + strand at 214.845 kb on - strand at 214.845 kb on - strand at 214.845 kb on - strand at 214.845 kb on - strand at 214.845 kb on - strand at 214.877 kb on + strand at 214.877 kb on + strand at 214.877 kb on + strand at 214.877 kb on + strand at 214.878 kb on - strand at 214.878 kb on - strand at 214.878 kb on - strand at 214.878 kb on - strand at 214.878 kb on - strand at 214.963 kb on + strand, within AO353_00945 at 214.963 kb on + strand, within AO353_00945 at 214.963 kb on + strand, within AO353_00945 at 214.963 kb on + strand, within AO353_00945 at 214.963 kb on + strand, within AO353_00945 at 214.963 kb on + strand, within AO353_00945 at 214.963 kb on + strand, within AO353_00945 at 214.964 kb on - strand, within AO353_00945 at 214.964 kb on - strand, within AO353_00945 at 214.964 kb on - strand, within AO353_00945 at 214.964 kb on - strand, within AO353_00945 at 214.964 kb on - strand, within AO353_00945 at 214.964 kb on - strand, within AO353_00945 at 214.964 kb on - strand, within AO353_00945 at 214.964 kb on - strand, within AO353_00945 at 214.964 kb on - strand, within AO353_00945 at 215.201 kb on + strand, within AO353_00945 at 215.201 kb on + strand, within AO353_00945 at 215.201 kb on + strand, within AO353_00945 at 215.201 kb on + strand, within AO353_00945 at 215.201 kb on + strand, within AO353_00945 at 215.201 kb on + strand, within AO353_00945 at 215.202 kb on - strand, within AO353_00945 at 215.202 kb on - strand, within AO353_00945 at 215.397 kb on + strand, within AO353_00945 at 215.397 kb on + strand, within AO353_00945 at 215.398 kb on - strand, within AO353_00945 at 215.398 kb on - strand, within AO353_00945 at 215.524 kb on + strand at 215.524 kb on + strand at 215.524 kb on + strand at 215.525 kb on - strand at 215.525 kb on - strand at 215.548 kb on + strand at 215.548 kb on + strand at 215.549 kb on - strand at 215.549 kb on - strand at 215.549 kb on - strand at 215.614 kb on + strand at 215.615 kb on - strand at 215.705 kb on + strand at 215.705 kb on + strand at 215.705 kb on + strand at 215.705 kb on + strand at 215.705 kb on + strand at 215.706 kb on - strand at 215.733 kb on + strand at 215.733 kb on + strand at 215.733 kb on + strand at 215.733 kb on + strand at 215.733 kb on + strand at 215.734 kb on - strand at 215.734 kb on - strand at 215.759 kb on + strand, within AO353_00950 at 215.760 kb on - strand, within AO353_00950 at 215.904 kb on + strand at 216.045 kb on + strand, within AO353_00950 at 216.045 kb on + strand, within AO353_00950 at 216.045 kb on + strand, within AO353_00950 at 216.045 kb on + strand, within AO353_00950 at 216.046 kb on - strand, within AO353_00950 at 216.046 kb on - strand, within AO353_00950 at 216.046 kb on - strand, within AO353_00950 at 216.046 kb on - strand, within AO353_00950 at 216.185 kb on + strand, within AO353_00950 at 216.185 kb on + strand, within AO353_00950 at 216.185 kb on + strand, within AO353_00950 at 216.185 kb on + strand, within AO353_00950 at 216.186 kb on - strand, within AO353_00950 at 216.186 kb on - strand, within AO353_00950 at 216.186 kb on - strand, within AO353_00950 at 216.186 kb on - strand, within AO353_00950 at 216.255 kb on - strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.291 kb on + strand, within AO353_00950 at 216.291 kb on + strand, within AO353_00950 at 216.291 kb on + strand, within AO353_00950 at 216.292 kb on - strand, within AO353_00950 at 216.292 kb on - strand, within AO353_00950 at 216.417 kb on - strand at 216.417 kb on - strand at 216.531 kb on - strand at 216.531 kb on - strand at 216.531 kb on - strand at 216.540 kb on - strand at 216.575 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 213,903 + AO353_00940 0.11 +0.5 213,903 + AO353_00940 0.11 +0.8 213,904 - AO353_00940 0.11 +0.1 213,904 - AO353_00940 0.11 -0.8 213,904 - AO353_00940 0.11 +0.7 213,904 - AO353_00940 0.11 -1.6 213,904 - AO353_00940 0.11 +2.1 213,904 - AO353_00940 0.11 -0.9 213,906 + AO353_00940 0.11 +0.7 213,906 + AO353_00940 0.11 -1.3 213,906 + AO353_00940 0.11 +0.6 213,906 + AO353_00940 0.11 +1.1 213,906 + AO353_00940 0.11 +0.5 213,906 + AO353_00940 0.11 -0.0 213,906 + AO353_00940 0.11 -0.4 213,907 - AO353_00940 0.12 -0.8 213,907 - AO353_00940 0.12 +0.4 213,907 - AO353_00940 0.12 -0.6 213,907 - AO353_00940 0.12 -0.7 213,907 - AO353_00940 0.12 -0.7 213,907 - AO353_00940 0.12 +0.8 213,907 - AO353_00940 0.12 +1.9 213,907 - AO353_00940 0.12 -0.5 213,907 - AO353_00940 0.12 +0.6 213,933 + AO353_00940 0.14 +1.1 213,933 + AO353_00940 0.14 -0.3 213,934 - AO353_00940 0.15 +0.1 213,934 - AO353_00940 0.15 +0.3 213,934 - AO353_00940 0.15 +0.8 214,172 + AO353_00940 0.40 +0.4 214,172 + AO353_00940 0.40 -1.5 214,173 - AO353_00940 0.40 -0.3 214,173 - AO353_00940 0.40 +0.8 214,173 - AO353_00940 0.40 -1.1 214,173 - AO353_00940 0.40 +0.6 214,173 - AO353_00940 0.40 +0.5 214,173 - AO353_00940 0.40 -0.9 214,173 - AO353_00940 0.40 -0.4 214,173 - AO353_00940 0.40 -1.2 214,213 - AO353_00940 0.45 -0.2 214,407 + AO353_00940 0.66 +1.3 214,407 + AO353_00940 0.66 +2.5 214,407 + AO353_00940 0.66 -0.8 214,407 + AO353_00940 0.66 +0.5 214,407 + AO353_00940 0.66 +0.7 214,408 - AO353_00940 0.66 +0.3 214,408 - AO353_00940 0.66 +1.3 214,408 - AO353_00940 0.66 -0.1 214,408 - AO353_00940 0.66 -0.3 214,408 - AO353_00940 0.66 +0.1 214,408 - AO353_00940 0.66 +0.2 214,408 - AO353_00940 0.66 -0.2 214,408 - AO353_00940 0.66 -1.5 214,408 - AO353_00940 0.66 +0.5 214,408 - AO353_00940 0.66 -1.3 214,408 - AO353_00940 0.66 -1.1 214,408 - AO353_00940 0.66 +1.3 214,408 - AO353_00940 0.66 +0.4 214,733 + +1.5 214,734 - +0.1 214,734 - +0.6 214,734 - -0.5 214,736 - -0.5 214,757 + -0.7 214,757 + +0.5 214,758 - +0.0 214,758 - +0.1 214,758 - -0.1 214,759 + -0.3 214,760 - +1.1 214,773 + +2.1 214,773 + +1.9 214,774 - +0.5 214,774 - -0.0 214,774 - +0.2 214,774 - +0.4 214,774 - +0.8 214,774 - +0.8 214,799 - -0.0 214,799 - +1.0 214,799 - -0.0 214,799 - +0.3 214,801 + +0.1 214,801 + +0.3 214,802 - -0.9 214,802 - -0.1 214,802 - +0.4 214,802 - -2.1 214,844 + -0.9 214,844 + +1.1 214,845 - -1.2 214,845 - +0.7 214,845 - +0.5 214,845 - +0.2 214,845 - +0.4 214,877 + +0.6 214,877 + +0.7 214,877 + +1.7 214,877 + -0.9 214,878 - +0.7 214,878 - +0.3 214,878 - -0.6 214,878 - +1.9 214,878 - -0.1 214,963 + AO353_00945 0.15 +0.7 214,963 + AO353_00945 0.15 +0.3 214,963 + AO353_00945 0.15 +0.9 214,963 + AO353_00945 0.15 +0.1 214,963 + AO353_00945 0.15 +0.5 214,963 + AO353_00945 0.15 +0.5 214,963 + AO353_00945 0.15 +0.1 214,964 - AO353_00945 0.15 -0.4 214,964 - AO353_00945 0.15 +0.9 214,964 - AO353_00945 0.15 +0.5 214,964 - AO353_00945 0.15 +0.4 214,964 - AO353_00945 0.15 +1.1 214,964 - AO353_00945 0.15 +0.2 214,964 - AO353_00945 0.15 -0.0 214,964 - AO353_00945 0.15 -0.5 214,964 - AO353_00945 0.15 +0.7 215,201 + AO353_00945 0.47 -0.4 215,201 + AO353_00945 0.47 -0.1 215,201 + AO353_00945 0.47 +1.3 215,201 + AO353_00945 0.47 +2.6 215,201 + AO353_00945 0.47 -0.7 215,201 + AO353_00945 0.47 +0.2 215,202 - AO353_00945 0.47 +1.0 215,202 - AO353_00945 0.47 +0.8 215,397 + AO353_00945 0.73 -0.5 215,397 + AO353_00945 0.73 -0.2 215,398 - AO353_00945 0.73 -0.5 215,398 - AO353_00945 0.73 +0.3 215,524 + -1.2 215,524 + -0.6 215,524 + +0.3 215,525 - -0.2 215,525 - -2.0 215,548 + -0.9 215,548 + +1.1 215,549 - +0.8 215,549 - +1.4 215,549 - +1.1 215,614 + +0.1 215,615 - -0.3 215,705 + -0.8 215,705 + -0.3 215,705 + -0.6 215,705 + -0.3 215,705 + -0.3 215,706 - -0.7 215,733 + +1.5 215,733 + -0.6 215,733 + +1.0 215,733 + -0.3 215,733 + +0.7 215,734 - -2.1 215,734 - -0.5 215,759 + AO353_00950 0.12 +0.6 215,760 - AO353_00950 0.12 -0.5 215,904 + +0.1 216,045 + AO353_00950 0.53 -0.0 216,045 + AO353_00950 0.53 +2.1 216,045 + AO353_00950 0.53 +0.5 216,045 + AO353_00950 0.53 -1.8 216,046 - AO353_00950 0.53 +2.9 216,046 - AO353_00950 0.53 +0.7 216,046 - AO353_00950 0.53 +0.7 216,046 - AO353_00950 0.53 -1.9 216,185 + AO353_00950 0.73 +1.5 216,185 + AO353_00950 0.73 -0.6 216,185 + AO353_00950 0.73 +1.4 216,185 + AO353_00950 0.73 +1.8 216,186 - AO353_00950 0.73 +0.2 216,186 - AO353_00950 0.73 +0.6 216,186 - AO353_00950 0.73 +0.7 216,186 - AO353_00950 0.73 -0.3 216,255 - AO353_00950 0.83 -0.7 216,287 + AO353_00950 0.88 -0.1 216,287 + AO353_00950 0.88 -0.7 216,287 + AO353_00950 0.88 +0.8 216,287 + AO353_00950 0.88 +0.6 216,287 + AO353_00950 0.88 -0.4 216,287 + AO353_00950 0.88 -0.2 216,287 + AO353_00950 0.88 -0.3 216,288 - AO353_00950 0.88 +0.7 216,288 - AO353_00950 0.88 -0.7 216,288 - AO353_00950 0.88 +1.9 216,288 - AO353_00950 0.88 -1.1 216,288 - AO353_00950 0.88 -0.8 216,288 - AO353_00950 0.88 +0.9 216,288 - AO353_00950 0.88 +0.9 216,288 - AO353_00950 0.88 +0.3 216,288 - AO353_00950 0.88 +1.3 216,291 + AO353_00950 0.89 -0.1 216,291 + AO353_00950 0.89 -0.1 216,291 + AO353_00950 0.89 +0.8 216,292 - AO353_00950 0.89 -0.3 216,292 - AO353_00950 0.89 -0.6 216,417 - -0.3 216,417 - +0.3 216,531 - -0.5 216,531 - +0.4 216,531 - -0.7 216,540 - +0.6 216,575 - +0.5
Or see this region's nucleotide sequence