Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_4135 and Shewana3_4136 are separated by 70 nucleotides Shewana3_4136 and Shewana3_4137 are separated by 12 nucleotides Shewana3_4137 and Shewana3_4138 are separated by 225 nucleotides
Shewana3_4135: Shewana3_4135 - F0F1 ATP synthase subunit C (RefSeq), at 4,968,754 to 4,969,005
_4135
Shewana3_4136: Shewana3_4136 - F0F1 ATP synthase subunit A (RefSeq), at 4,969,076 to 4,969,870
_4136
Shewana3_4137: Shewana3_4137 - ATP synthase I chain (RefSeq), at 4,969,883 to 4,970,266
_4137
Shewana3_4138: Shewana3_4138 - chromosome segregation DNA-binding protein (RefSeq), at 4,970,492 to 4,971,370
_4138
Position (kb) 4969
4970
4971 Strain fitness (log2 ratio) -2
-1
0
1 at 4970.609 kb on - strand, within Shewana3_4138 at 4970.617 kb on + strand, within Shewana3_4138 at 4970.625 kb on - strand, within Shewana3_4138 at 4970.720 kb on - strand, within Shewana3_4138 at 4970.789 kb on + strand, within Shewana3_4138 at 4970.797 kb on - strand, within Shewana3_4138 at 4970.822 kb on - strand, within Shewana3_4138 at 4970.828 kb on - strand, within Shewana3_4138
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 4,970,609 - Shewana3_4138 0.13 +0.5 4,970,617 + Shewana3_4138 0.14 -1.1 4,970,625 - Shewana3_4138 0.15 -0.9 4,970,720 - Shewana3_4138 0.26 -0.3 4,970,789 + Shewana3_4138 0.34 -0.9 4,970,797 - Shewana3_4138 0.35 -0.5 4,970,822 - Shewana3_4138 0.38 -0.3 4,970,828 - Shewana3_4138 0.38 -2.4
Or see this region's nucleotide sequence