Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3943 and Shewana3_3944 are separated by 16 nucleotides Shewana3_3944 and Shewana3_3945 are separated by 58 nucleotides Shewana3_3945 and Shewana3_3946 are separated by 293 nucleotides
Shewana3_3943: Shewana3_3943 - cell division protein FtsZ (RefSeq), at 4,740,699 to 4,741,901
_3943
Shewana3_3944: Shewana3_3944 - methyltransferase type 11 (RefSeq), at 4,741,918 to 4,742,556
_3944
Shewana3_3945: Shewana3_3945 - hypothetical protein (RefSeq), at 4,742,615 to 4,742,968
_3945
Shewana3_3946: Shewana3_3946 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq), at 4,743,262 to 4,745,382
_3946
Position (kb)
4742
4743 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4741.674 kb on - strand, within Shewana3_3943 at 4741.716 kb on - strand, within Shewana3_3943 at 4741.774 kb on + strand, within Shewana3_3943 at 4741.780 kb on - strand, within Shewana3_3943 at 4742.051 kb on + strand, within Shewana3_3944 at 4742.051 kb on + strand, within Shewana3_3944 at 4742.059 kb on - strand, within Shewana3_3944 at 4742.076 kb on - strand, within Shewana3_3944 at 4742.078 kb on + strand, within Shewana3_3944 at 4742.109 kb on - strand, within Shewana3_3944 at 4742.282 kb on + strand, within Shewana3_3944 at 4742.461 kb on + strand, within Shewana3_3944 at 4742.469 kb on - strand, within Shewana3_3944 at 4742.541 kb on + strand at 4742.786 kb on + strand, within Shewana3_3945 at 4742.791 kb on - strand, within Shewana3_3945 at 4742.794 kb on - strand, within Shewana3_3945 at 4742.866 kb on + strand, within Shewana3_3945 at 4742.874 kb on - strand, within Shewana3_3945 at 4742.912 kb on + strand, within Shewana3_3945 at 4742.925 kb on - strand, within Shewana3_3945 at 4742.943 kb on - strand at 4742.982 kb on - strand at 4743.296 kb on + strand at 4743.341 kb on - strand at 4743.369 kb on + strand at 4743.444 kb on - strand at 4743.454 kb on + strand at 4743.589 kb on - strand, within Shewana3_3946 at 4743.601 kb on - strand, within Shewana3_3946 at 4743.606 kb on + strand, within Shewana3_3946 at 4743.798 kb on + strand, within Shewana3_3946 at 4743.798 kb on + strand, within Shewana3_3946 at 4743.870 kb on + strand, within Shewana3_3946
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 4,741,674 - Shewana3_3943 0.81 +0.5 4,741,716 - Shewana3_3943 0.85 -0.2 4,741,774 + Shewana3_3943 0.89 -0.5 4,741,780 - Shewana3_3943 0.90 -0.3 4,742,051 + Shewana3_3944 0.21 +0.2 4,742,051 + Shewana3_3944 0.21 +0.6 4,742,059 - Shewana3_3944 0.22 +0.7 4,742,076 - Shewana3_3944 0.25 +0.5 4,742,078 + Shewana3_3944 0.25 +0.9 4,742,109 - Shewana3_3944 0.30 +0.6 4,742,282 + Shewana3_3944 0.57 -0.1 4,742,461 + Shewana3_3944 0.85 -0.2 4,742,469 - Shewana3_3944 0.86 +0.1 4,742,541 + -0.2 4,742,786 + Shewana3_3945 0.48 -0.1 4,742,791 - Shewana3_3945 0.50 +0.1 4,742,794 - Shewana3_3945 0.51 -0.4 4,742,866 + Shewana3_3945 0.71 -0.4 4,742,874 - Shewana3_3945 0.73 -1.0 4,742,912 + Shewana3_3945 0.84 -1.0 4,742,925 - Shewana3_3945 0.88 -0.9 4,742,943 - +0.1 4,742,982 - -0.5 4,743,296 + -0.1 4,743,341 - -3.0 4,743,369 + -1.0 4,743,444 - -1.1 4,743,454 + -0.9 4,743,589 - Shewana3_3946 0.15 -0.5 4,743,601 - Shewana3_3946 0.16 -0.2 4,743,606 + Shewana3_3946 0.16 -0.1 4,743,798 + Shewana3_3946 0.25 -0.3 4,743,798 + Shewana3_3946 0.25 +0.0 4,743,870 + Shewana3_3946 0.29 -0.7
Or see this region's nucleotide sequence