Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3930 and Shewana3_3931 are separated by 79 nucleotides Shewana3_3931 and Shewana3_3932 overlap by 8 nucleotides Shewana3_3932 and Shewana3_3933 are separated by 0 nucleotides
Shewana3_3930: Shewana3_3930 - LysR family transcriptional regulator (RefSeq), at 4,724,223 to 4,725,185
_3930
Shewana3_3931: Shewana3_3931 - patatin (RefSeq), at 4,725,265 to 4,726,137
_3931
Shewana3_3932: Shewana3_3932 - transcriptional regulator (RefSeq), at 4,726,130 to 4,727,065
_3932
Shewana3_3933: Shewana3_3933 - hypothetical protein (RefSeq), at 4,727,066 to 4,727,920
_3933
Position (kb)
4726
4727
4728 Strain fitness (log2 ratio)
-1
0
1 at 4725.135 kb on + strand at 4725.263 kb on - strand at 4725.271 kb on + strand at 4725.291 kb on - strand at 4725.520 kb on - strand, within Shewana3_3931 at 4725.546 kb on - strand, within Shewana3_3931 at 4725.692 kb on + strand, within Shewana3_3931 at 4725.700 kb on - strand, within Shewana3_3931 at 4725.856 kb on + strand, within Shewana3_3931 at 4725.874 kb on - strand, within Shewana3_3931 at 4725.893 kb on + strand, within Shewana3_3931 at 4726.016 kb on - strand, within Shewana3_3931 at 4726.098 kb on + strand at 4726.110 kb on + strand at 4726.118 kb on - strand at 4726.509 kb on - strand, within Shewana3_3932 at 4726.643 kb on + strand, within Shewana3_3932 at 4726.794 kb on - strand, within Shewana3_3932 at 4726.794 kb on - strand, within Shewana3_3932 at 4726.806 kb on - strand, within Shewana3_3932 at 4727.075 kb on + strand at 4727.165 kb on + strand, within Shewana3_3933 at 4727.375 kb on - strand, within Shewana3_3933 at 4727.396 kb on + strand, within Shewana3_3933 at 4727.404 kb on - strand, within Shewana3_3933 at 4727.501 kb on - strand, within Shewana3_3933 at 4727.524 kb on - strand, within Shewana3_3933 at 4727.832 kb on - strand, within Shewana3_3933 at 4727.888 kb on - strand at 4727.984 kb on + strand at 4728.027 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 4,725,135 + +0.1 4,725,263 - +0.6 4,725,271 + +0.2 4,725,291 - +0.7 4,725,520 - Shewana3_3931 0.29 -0.3 4,725,546 - Shewana3_3931 0.32 -1.5 4,725,692 + Shewana3_3931 0.49 -0.2 4,725,700 - Shewana3_3931 0.50 +0.3 4,725,856 + Shewana3_3931 0.68 -0.3 4,725,874 - Shewana3_3931 0.70 +0.3 4,725,893 + Shewana3_3931 0.72 -0.0 4,726,016 - Shewana3_3931 0.86 -0.3 4,726,098 + -0.5 4,726,110 + -0.1 4,726,118 - -0.3 4,726,509 - Shewana3_3932 0.40 -0.2 4,726,643 + Shewana3_3932 0.55 -1.6 4,726,794 - Shewana3_3932 0.71 -1.2 4,726,794 - Shewana3_3932 0.71 -0.1 4,726,806 - Shewana3_3932 0.72 -1.3 4,727,075 + -1.7 4,727,165 + Shewana3_3933 0.12 -1.0 4,727,375 - Shewana3_3933 0.36 +0.6 4,727,396 + Shewana3_3933 0.39 -0.5 4,727,404 - Shewana3_3933 0.40 -0.3 4,727,501 - Shewana3_3933 0.51 +0.0 4,727,524 - Shewana3_3933 0.54 -0.1 4,727,832 - Shewana3_3933 0.90 +1.1 4,727,888 - -0.7 4,727,984 + -1.3 4,728,027 + -0.1
Or see this region's nucleotide sequence