Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3765 and Shewana3_3766 are separated by 59 nucleotides Shewana3_3766 and Shewana3_3767 are separated by 103 nucleotides
Shewana3_3765: Shewana3_3765 - transporter DMT superfamily protein (RefSeq), at 4,526,576 to 4,527,463
_3765
Shewana3_3766: Shewana3_3766 - hypothetical protein (RefSeq), at 4,527,523 to 4,528,041
_3766
Shewana3_3767: Shewana3_3767 - N-acetylglutamate synthase (RefSeq), at 4,528,145 to 4,529,482
_3767
Position (kb)
4527
4528
4529 Strain fitness (log2 ratio)
-2
-1
0
1 at 4526.628 kb on + strand at 4526.726 kb on - strand, within Shewana3_3765 at 4526.883 kb on + strand, within Shewana3_3765 at 4527.026 kb on - strand, within Shewana3_3765 at 4527.164 kb on + strand, within Shewana3_3765 at 4527.164 kb on + strand, within Shewana3_3765 at 4527.164 kb on + strand, within Shewana3_3765 at 4527.172 kb on - strand, within Shewana3_3765 at 4527.332 kb on + strand, within Shewana3_3765 at 4527.340 kb on - strand, within Shewana3_3765 at 4527.506 kb on + strand at 4527.520 kb on - strand at 4527.520 kb on - strand at 4527.520 kb on - strand at 4527.574 kb on - strand at 4527.638 kb on + strand, within Shewana3_3766 at 4527.695 kb on + strand, within Shewana3_3766 at 4527.702 kb on + strand, within Shewana3_3766 at 4527.702 kb on + strand, within Shewana3_3766 at 4527.732 kb on + strand, within Shewana3_3766 at 4527.740 kb on - strand, within Shewana3_3766 at 4527.821 kb on + strand, within Shewana3_3766 at 4527.933 kb on + strand, within Shewana3_3766 at 4527.940 kb on - strand, within Shewana3_3766 at 4527.940 kb on - strand, within Shewana3_3766 at 4528.261 kb on - strand at 4528.331 kb on - strand, within Shewana3_3767 at 4528.395 kb on + strand, within Shewana3_3767 at 4528.413 kb on + strand, within Shewana3_3767 at 4528.430 kb on + strand, within Shewana3_3767 at 4528.438 kb on - strand, within Shewana3_3767 at 4528.438 kb on - strand, within Shewana3_3767 at 4528.522 kb on - strand, within Shewana3_3767 at 4528.614 kb on + strand, within Shewana3_3767 at 4528.751 kb on + strand, within Shewana3_3767 at 4528.753 kb on - strand, within Shewana3_3767
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 4,526,628 + +0.7 4,526,726 - Shewana3_3765 0.17 +0.3 4,526,883 + Shewana3_3765 0.35 -0.3 4,527,026 - Shewana3_3765 0.51 -0.2 4,527,164 + Shewana3_3765 0.66 -0.0 4,527,164 + Shewana3_3765 0.66 -0.6 4,527,164 + Shewana3_3765 0.66 -0.5 4,527,172 - Shewana3_3765 0.67 -0.6 4,527,332 + Shewana3_3765 0.85 -0.7 4,527,340 - Shewana3_3765 0.86 -1.1 4,527,506 + -0.7 4,527,520 - +0.2 4,527,520 - +0.1 4,527,520 - -0.1 4,527,574 - +1.1 4,527,638 + Shewana3_3766 0.22 -0.4 4,527,695 + Shewana3_3766 0.33 -0.7 4,527,702 + Shewana3_3766 0.34 -1.0 4,527,702 + Shewana3_3766 0.34 +0.0 4,527,732 + Shewana3_3766 0.40 -1.2 4,527,740 - Shewana3_3766 0.42 +0.0 4,527,821 + Shewana3_3766 0.57 -0.4 4,527,933 + Shewana3_3766 0.79 -0.6 4,527,940 - Shewana3_3766 0.80 -0.0 4,527,940 - Shewana3_3766 0.80 -1.4 4,528,261 - +0.3 4,528,331 - Shewana3_3767 0.14 +0.0 4,528,395 + Shewana3_3767 0.19 -2.1 4,528,413 + Shewana3_3767 0.20 -0.8 4,528,430 + Shewana3_3767 0.21 -0.6 4,528,438 - Shewana3_3767 0.22 +0.7 4,528,438 - Shewana3_3767 0.22 +0.0 4,528,522 - Shewana3_3767 0.28 +0.9 4,528,614 + Shewana3_3767 0.35 -0.9 4,528,751 + Shewana3_3767 0.45 -0.7 4,528,753 - Shewana3_3767 0.45 +0.4
Or see this region's nucleotide sequence