Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt groEL and groES are separated by 57 nucleotides groES and Shewana3_3569 are separated by 227 nucleotides Shewana3_3569 and Shewana3_3570 overlap by 4 nucleotides
Shewana3_3567: groEL - chaperonin GroEL (RefSeq), at 4,278,553 to 4,280,190
groEL
Shewana3_3568: groES - co-chaperonin GroES (RefSeq), at 4,280,248 to 4,280,538
groES
Shewana3_3569: Shewana3_3569 - MATE efflux family protein (RefSeq), at 4,280,766 to 4,282,124
_3569
Shewana3_3570: Shewana3_3570 - LysR family transcriptional regulator (RefSeq), at 4,282,121 to 4,283,116
_3570
Position (kb)
4280
4281
4282
4283 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4280.781 kb on + strand at 4281.009 kb on + strand, within Shewana3_3569 at 4281.072 kb on - strand, within Shewana3_3569 at 4281.072 kb on - strand, within Shewana3_3569 at 4281.133 kb on + strand, within Shewana3_3569 at 4281.223 kb on + strand, within Shewana3_3569 at 4281.369 kb on + strand, within Shewana3_3569 at 4281.830 kb on - strand, within Shewana3_3569 at 4281.885 kb on + strand, within Shewana3_3569 at 4281.885 kb on + strand, within Shewana3_3569 at 4281.917 kb on + strand, within Shewana3_3569 at 4281.917 kb on + strand, within Shewana3_3569 at 4282.007 kb on + strand at 4282.039 kb on - strand at 4282.408 kb on + strand, within Shewana3_3570 at 4282.490 kb on - strand, within Shewana3_3570 at 4282.587 kb on + strand, within Shewana3_3570 at 4282.637 kb on + strand, within Shewana3_3570 at 4282.662 kb on - strand, within Shewana3_3570 at 4282.812 kb on - strand, within Shewana3_3570
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 4,280,781 + -3.4 4,281,009 + Shewana3_3569 0.18 -0.5 4,281,072 - Shewana3_3569 0.23 -2.9 4,281,072 - Shewana3_3569 0.23 -2.0 4,281,133 + Shewana3_3569 0.27 -0.3 4,281,223 + Shewana3_3569 0.34 -1.6 4,281,369 + Shewana3_3569 0.44 +0.1 4,281,830 - Shewana3_3569 0.78 -0.0 4,281,885 + Shewana3_3569 0.82 -0.6 4,281,885 + Shewana3_3569 0.82 -2.3 4,281,917 + Shewana3_3569 0.85 -2.6 4,281,917 + Shewana3_3569 0.85 -0.9 4,282,007 + -1.3 4,282,039 - -1.5 4,282,408 + Shewana3_3570 0.29 -0.8 4,282,490 - Shewana3_3570 0.37 +0.5 4,282,587 + Shewana3_3570 0.47 +0.0 4,282,637 + Shewana3_3570 0.52 +0.6 4,282,662 - Shewana3_3570 0.54 -0.5 4,282,812 - Shewana3_3570 0.69 +0.1
Or see this region's nucleotide sequence