Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3566 and groEL are separated by 501 nucleotides groEL and groES are separated by 57 nucleotides groES and Shewana3_3569 are separated by 227 nucleotides
Shewana3_3566: Shewana3_3566 - hypothetical protein (RefSeq), at 4,276,585 to 4,278,051
_3566
Shewana3_3567: groEL - chaperonin GroEL (RefSeq), at 4,278,553 to 4,280,190
groEL
Shewana3_3568: groES - co-chaperonin GroES (RefSeq), at 4,280,248 to 4,280,538
groES
Shewana3_3569: Shewana3_3569 - MATE efflux family protein (RefSeq), at 4,280,766 to 4,282,124
_3569
Position (kb)
4278
4279
4280
4281 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4277.572 kb on + strand, within Shewana3_3566 at 4277.602 kb on + strand, within Shewana3_3566 at 4277.689 kb on + strand, within Shewana3_3566 at 4277.704 kb on + strand, within Shewana3_3566 at 4277.712 kb on - strand, within Shewana3_3566 at 4277.860 kb on + strand, within Shewana3_3566 at 4277.860 kb on + strand, within Shewana3_3566 at 4277.860 kb on + strand, within Shewana3_3566 at 4277.867 kb on - strand, within Shewana3_3566 at 4277.873 kb on + strand, within Shewana3_3566 at 4277.878 kb on + strand, within Shewana3_3566 at 4277.880 kb on + strand, within Shewana3_3566 at 4277.932 kb on + strand at 4277.971 kb on + strand at 4277.995 kb on + strand at 4277.995 kb on + strand at 4277.995 kb on + strand at 4277.995 kb on + strand at 4277.995 kb on + strand at 4277.995 kb on + strand at 4278.003 kb on - strand at 4278.003 kb on - strand at 4278.118 kb on + strand at 4278.118 kb on + strand at 4278.118 kb on + strand at 4278.118 kb on + strand at 4278.118 kb on + strand at 4278.118 kb on + strand at 4278.119 kb on + strand at 4278.119 kb on + strand at 4278.125 kb on - strand at 4278.127 kb on - strand at 4278.143 kb on + strand at 4278.143 kb on + strand at 4278.151 kb on - strand at 4278.173 kb on - strand at 4278.209 kb on + strand at 4278.213 kb on + strand at 4278.213 kb on + strand at 4278.213 kb on + strand at 4278.232 kb on + strand at 4278.232 kb on + strand at 4278.232 kb on - strand at 4278.240 kb on + strand at 4278.240 kb on - strand at 4278.240 kb on - strand at 4278.248 kb on - strand at 4278.277 kb on + strand at 4278.278 kb on - strand at 4278.285 kb on - strand at 4278.336 kb on - strand at 4278.365 kb on + strand at 4278.462 kb on - strand at 4280.781 kb on + strand at 4281.009 kb on + strand, within Shewana3_3569 at 4281.072 kb on - strand, within Shewana3_3569 at 4281.072 kb on - strand, within Shewana3_3569 at 4281.133 kb on + strand, within Shewana3_3569
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 4,277,572 + Shewana3_3566 0.67 +0.5 4,277,602 + Shewana3_3566 0.69 -0.9 4,277,689 + Shewana3_3566 0.75 +1.7 4,277,704 + Shewana3_3566 0.76 -1.0 4,277,712 - Shewana3_3566 0.77 -2.0 4,277,860 + Shewana3_3566 0.87 -0.8 4,277,860 + Shewana3_3566 0.87 -1.2 4,277,860 + Shewana3_3566 0.87 -0.2 4,277,867 - Shewana3_3566 0.87 -2.1 4,277,873 + Shewana3_3566 0.88 -0.2 4,277,878 + Shewana3_3566 0.88 -2.0 4,277,880 + Shewana3_3566 0.88 -0.3 4,277,932 + +0.2 4,277,971 + +0.6 4,277,995 + -0.1 4,277,995 + -1.4 4,277,995 + -0.0 4,277,995 + +0.1 4,277,995 + +0.8 4,277,995 + +0.2 4,278,003 - -1.1 4,278,003 - +0.3 4,278,118 + +0.1 4,278,118 + +0.1 4,278,118 + +0.9 4,278,118 + +1.0 4,278,118 + +0.1 4,278,118 + -1.2 4,278,119 + +0.8 4,278,119 + -0.2 4,278,125 - -1.3 4,278,127 - -0.5 4,278,143 + -0.1 4,278,143 + +0.2 4,278,151 - -1.0 4,278,173 - -0.7 4,278,209 + +0.0 4,278,213 + +0.5 4,278,213 + +0.7 4,278,213 + +0.2 4,278,232 + +0.3 4,278,232 + +0.8 4,278,232 - -0.5 4,278,240 + -0.0 4,278,240 - +0.2 4,278,240 - -0.2 4,278,248 - +0.3 4,278,277 + -0.3 4,278,278 - +0.2 4,278,285 - -0.2 4,278,336 - -0.5 4,278,365 + -0.2 4,278,462 - +0.7 4,280,781 + -3.4 4,281,009 + Shewana3_3569 0.18 -0.5 4,281,072 - Shewana3_3569 0.23 -2.9 4,281,072 - Shewana3_3569 0.23 -2.0 4,281,133 + Shewana3_3569 0.27 -0.3
Or see this region's nucleotide sequence