Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3489 and Shewana3_3490 are separated by 176 nucleotides Shewana3_3490 and Shewana3_3491 are separated by 275 nucleotides
Shewana3_3489: Shewana3_3489 - hypothetical protein (RefSeq), at 4,183,361 to 4,185,589
_3489
Shewana3_3490: Shewana3_3490 - hypothetical protein (RefSeq), at 4,185,766 to 4,186,008
_3490
Shewana3_3491: Shewana3_3491 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 4,186,284 to 4,187,948
_3491
Position (kb)
4185
4186
4187 Strain fitness (log2 ratio)
-2
-1
0
1 at 4184.900 kb on + strand, within Shewana3_3489 at 4184.912 kb on + strand, within Shewana3_3489 at 4184.912 kb on + strand, within Shewana3_3489 at 4184.912 kb on + strand, within Shewana3_3489 at 4184.918 kb on + strand, within Shewana3_3489 at 4184.977 kb on + strand, within Shewana3_3489 at 4184.987 kb on + strand, within Shewana3_3489 at 4185.062 kb on + strand, within Shewana3_3489 at 4185.210 kb on + strand, within Shewana3_3489 at 4185.470 kb on - strand at 4185.518 kb on - strand at 4185.763 kb on + strand at 4185.763 kb on + strand at 4185.771 kb on + strand at 4185.781 kb on + strand at 4185.789 kb on - strand at 4185.849 kb on - strand, within Shewana3_3490 at 4185.930 kb on + strand, within Shewana3_3490 at 4185.957 kb on + strand, within Shewana3_3490 at 4185.957 kb on + strand, within Shewana3_3490 at 4185.965 kb on - strand, within Shewana3_3490 at 4186.010 kb on + strand at 4186.049 kb on + strand at 4186.238 kb on + strand at 4186.246 kb on - strand at 4186.348 kb on + strand at 4186.363 kb on - strand at 4186.490 kb on - strand, within Shewana3_3491 at 4186.490 kb on - strand, within Shewana3_3491 at 4186.519 kb on - strand, within Shewana3_3491 at 4186.960 kb on - strand, within Shewana3_3491
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 4,184,900 + Shewana3_3489 0.69 -0.1 4,184,912 + Shewana3_3489 0.70 -0.6 4,184,912 + Shewana3_3489 0.70 -0.5 4,184,912 + Shewana3_3489 0.70 +0.5 4,184,918 + Shewana3_3489 0.70 +0.2 4,184,977 + Shewana3_3489 0.72 -0.3 4,184,987 + Shewana3_3489 0.73 -0.9 4,185,062 + Shewana3_3489 0.76 -1.0 4,185,210 + Shewana3_3489 0.83 -0.4 4,185,470 - +0.1 4,185,518 - +0.2 4,185,763 + -0.7 4,185,763 + -0.3 4,185,771 + -0.8 4,185,781 + -1.4 4,185,789 - -0.0 4,185,849 - Shewana3_3490 0.34 -1.0 4,185,930 + Shewana3_3490 0.67 -1.1 4,185,957 + Shewana3_3490 0.79 -1.9 4,185,957 + Shewana3_3490 0.79 -0.5 4,185,965 - Shewana3_3490 0.82 -1.2 4,186,010 + +0.7 4,186,049 + -1.6 4,186,238 + -0.5 4,186,246 - -2.5 4,186,348 + +0.0 4,186,363 - -1.1 4,186,490 - Shewana3_3491 0.12 -1.3 4,186,490 - Shewana3_3491 0.12 +0.5 4,186,519 - Shewana3_3491 0.14 +0.1 4,186,960 - Shewana3_3491 0.41 +0.4
Or see this region's nucleotide sequence