Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3111 and Shewana3_3112 are separated by 138 nucleotides Shewana3_3112 and Shewana3_3113 are separated by 43 nucleotides
Shewana3_3111: Shewana3_3111 - transmembrane glucosamine N-acetyltransferase NagX (from data) , at 3,731,226 to 3,732,413
_3111
Shewana3_3112: Shewana3_3112 - N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) , at 3,732,552 to 3,733,688
_3112
Shewana3_3113: Shewana3_3113 - Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) , at 3,733,732 to 3,734,730
_3113
Position (kb)
3732
3733
3734 Strain fitness (log2 ratio)
-2
-1
0
1 at 3731.555 kb on + strand, within Shewana3_3111 at 3731.585 kb on - strand, within Shewana3_3111 at 3731.629 kb on - strand, within Shewana3_3111 at 3731.629 kb on - strand, within Shewana3_3111 at 3731.688 kb on + strand, within Shewana3_3111 at 3731.772 kb on + strand, within Shewana3_3111 at 3731.782 kb on + strand, within Shewana3_3111 at 3731.841 kb on + strand, within Shewana3_3111 at 3731.841 kb on + strand, within Shewana3_3111 at 3732.076 kb on + strand, within Shewana3_3111 at 3732.185 kb on - strand, within Shewana3_3111 at 3732.423 kb on - strand at 3732.606 kb on - strand at 3732.628 kb on - strand at 3732.745 kb on - strand, within Shewana3_3112 at 3732.745 kb on - strand, within Shewana3_3112 at 3732.745 kb on - strand, within Shewana3_3112 at 3732.747 kb on + strand, within Shewana3_3112 at 3732.747 kb on + strand, within Shewana3_3112 at 3732.747 kb on + strand, within Shewana3_3112 at 3732.776 kb on - strand, within Shewana3_3112 at 3732.843 kb on - strand, within Shewana3_3112 at 3732.853 kb on - strand, within Shewana3_3112 at 3732.864 kb on + strand, within Shewana3_3112 at 3733.127 kb on + strand, within Shewana3_3112 at 3733.127 kb on + strand, within Shewana3_3112 at 3733.261 kb on - strand, within Shewana3_3112 at 3733.351 kb on - strand, within Shewana3_3112 at 3733.544 kb on + strand, within Shewana3_3112 at 3733.552 kb on - strand, within Shewana3_3112 at 3733.612 kb on + strand at 3733.706 kb on - strand at 3733.893 kb on - strand, within Shewana3_3113 at 3733.937 kb on + strand, within Shewana3_3113 at 3733.937 kb on + strand, within Shewana3_3113 at 3734.010 kb on + strand, within Shewana3_3113 at 3734.031 kb on - strand, within Shewana3_3113 at 3734.031 kb on - strand, within Shewana3_3113 at 3734.092 kb on + strand, within Shewana3_3113 at 3734.283 kb on - strand, within Shewana3_3113
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 3,731,555 + Shewana3_3111 0.28 +0.4 3,731,585 - Shewana3_3111 0.30 +0.4 3,731,629 - Shewana3_3111 0.34 +0.1 3,731,629 - Shewana3_3111 0.34 +0.5 3,731,688 + Shewana3_3111 0.39 -0.1 3,731,772 + Shewana3_3111 0.46 -1.1 3,731,782 + Shewana3_3111 0.47 -0.4 3,731,841 + Shewana3_3111 0.52 -1.5 3,731,841 + Shewana3_3111 0.52 -1.1 3,732,076 + Shewana3_3111 0.72 -0.6 3,732,185 - Shewana3_3111 0.81 +0.1 3,732,423 - +0.0 3,732,606 - -2.0 3,732,628 - +0.1 3,732,745 - Shewana3_3112 0.17 +0.3 3,732,745 - Shewana3_3112 0.17 +0.8 3,732,745 - Shewana3_3112 0.17 +0.2 3,732,747 + Shewana3_3112 0.17 +0.5 3,732,747 + Shewana3_3112 0.17 -0.8 3,732,747 + Shewana3_3112 0.17 +0.9 3,732,776 - Shewana3_3112 0.20 +0.3 3,732,843 - Shewana3_3112 0.26 +0.4 3,732,853 - Shewana3_3112 0.26 +0.8 3,732,864 + Shewana3_3112 0.27 +0.4 3,733,127 + Shewana3_3112 0.51 -0.2 3,733,127 + Shewana3_3112 0.51 -0.6 3,733,261 - Shewana3_3112 0.62 -0.2 3,733,351 - Shewana3_3112 0.70 +0.3 3,733,544 + Shewana3_3112 0.87 +0.3 3,733,552 - Shewana3_3112 0.88 +1.4 3,733,612 + -2.2 3,733,706 - +0.0 3,733,893 - Shewana3_3113 0.16 +1.0 3,733,937 + Shewana3_3113 0.21 +0.3 3,733,937 + Shewana3_3113 0.21 +0.4 3,734,010 + Shewana3_3113 0.28 +0.4 3,734,031 - Shewana3_3113 0.30 +0.2 3,734,031 - Shewana3_3113 0.30 +0.7 3,734,092 + Shewana3_3113 0.36 -0.1 3,734,283 - Shewana3_3113 0.55 -0.3
Or see this region's nucleotide sequence