Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2877
Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,440,203 | - | Shewana3_2876 | 0.81 | +0.6 | |
3,440,375 | + | +0.3 | |||
3,440,388 | - | +0.9 | |||
3,440,456 | - | -0.6 | |||
3,440,817 | - | -1.0 | |||
3,440,856 | + | -0.2 | |||
3,440,856 | + | +0.2 | |||
3,440,864 | - | -1.3 | |||
3,440,886 | - | -1.0 | |||
3,441,017 | + | -0.8 | |||
3,441,147 | - | Shewana3_2877 | 0.10 | +0.8 | |
3,441,147 | - | Shewana3_2877 | 0.10 | +0.4 | |
3,441,147 | - | Shewana3_2877 | 0.10 | +1.0 | |
3,441,435 | - | Shewana3_2877 | 0.40 | +0.6 | |
3,441,789 | - | Shewana3_2877 | 0.76 | +0.2 | |
3,442,371 | - | -1.6 | |||
3,442,395 | - | Shewana3_2878 | 0.11 | +1.1 | |
3,442,481 | + | Shewana3_2878 | 0.18 | -0.8 | |
3,442,505 | - | Shewana3_2878 | 0.20 | -0.1 | |
3,442,588 | - | Shewana3_2878 | 0.26 | +0.1 | |
3,442,643 | + | Shewana3_2878 | 0.31 | +1.9 | |
3,442,750 | - | Shewana3_2878 | 0.39 | +0.4 | |
3,442,800 | + | Shewana3_2878 | 0.43 | +0.3 | |
3,442,839 | + | Shewana3_2878 | 0.46 | -0.6 | |
3,442,857 | + | Shewana3_2878 | 0.47 | -2.2 | |
3,442,934 | + | Shewana3_2878 | 0.53 | -0.4 | |
3,442,947 | - | Shewana3_2878 | 0.54 | -0.6 |
Or see this region's nucleotide sequence