Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2766
Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,303,392 | - | -1.1 | |||
3,303,642 | + | -1.4 | |||
3,303,750 | + | fabG | Shewana3_2765 | 0.24 | +0.9 |
3,303,758 | - | fabG | Shewana3_2765 | 0.25 | +0.3 |
3,304,841 | + | Shewana3_2766 | 0.54 | +0.5 | |
3,304,849 | - | Shewana3_2766 | 0.55 | +1.4 | |
3,304,907 | + | Shewana3_2766 | 0.62 | -0.6 | |
3,304,908 | + | Shewana3_2766 | 0.62 | -0.4 | |
3,304,980 | - | Shewana3_2766 | 0.70 | +0.9 | |
3,305,067 | - | Shewana3_2766 | 0.80 | +0.8 | |
3,305,110 | + | Shewana3_2766 | 0.84 | -0.1 | |
3,305,143 | - | Shewana3_2766 | 0.88 | +0.9 | |
3,305,247 | - | +0.1 | |||
3,305,416 | - | +1.0 | |||
3,305,471 | - | Shewana3_2767 | 0.10 | -0.1 | |
3,305,510 | + | Shewana3_2767 | 0.14 | -0.8 | |
3,305,675 | - | Shewana3_2767 | 0.28 | +1.0 | |
3,305,704 | - | Shewana3_2767 | 0.31 | +1.1 | |
3,305,873 | - | Shewana3_2767 | 0.45 | +1.2 | |
3,305,978 | + | Shewana3_2767 | 0.54 | -1.3 | |
3,305,986 | - | Shewana3_2767 | 0.55 | +0.8 | |
3,306,124 | + | Shewana3_2767 | 0.67 | -1.7 | |
3,306,124 | + | Shewana3_2767 | 0.67 | +0.9 |
Or see this region's nucleotide sequence