Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_2681 and Shewana3_2682 are separated by 232 nucleotides Shewana3_2682 and Shewana3_2683 are separated by 239 nucleotides
Shewana3_2681: Shewana3_2681 - vibriolysin (RefSeq), at 3,204,926 to 3,206,428
_2681
Shewana3_2682: Shewana3_2682 - CdaR family transcriptional regulator (RefSeq), at 3,206,661 to 3,207,893
_2682
Shewana3_2683: Shewana3_2683 - catalase domain-containing protein (RefSeq), at 3,208,133 to 3,209,131
_2683
Position (kb)
3206
3207
3208 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3205.740 kb on + strand, within Shewana3_2681 at 3205.748 kb on - strand, within Shewana3_2681 at 3205.988 kb on + strand, within Shewana3_2681 at 3206.076 kb on + strand, within Shewana3_2681 at 3206.298 kb on - strand at 3206.302 kb on + strand at 3206.310 kb on - strand at 3206.396 kb on - strand at 3206.681 kb on - strand at 3206.793 kb on + strand, within Shewana3_2682 at 3207.200 kb on - strand, within Shewana3_2682 at 3207.342 kb on - strand, within Shewana3_2682 at 3207.532 kb on + strand, within Shewana3_2682 at 3207.539 kb on - strand, within Shewana3_2682 at 3207.551 kb on + strand, within Shewana3_2682 at 3207.584 kb on + strand, within Shewana3_2682 at 3207.613 kb on - strand, within Shewana3_2682 at 3207.644 kb on + strand, within Shewana3_2682 at 3207.673 kb on - strand, within Shewana3_2682 at 3207.692 kb on + strand at 3207.780 kb on - strand at 3208.019 kb on + strand at 3208.021 kb on + strand at 3208.261 kb on - strand, within Shewana3_2683 at 3208.332 kb on - strand, within Shewana3_2683 at 3208.435 kb on + strand, within Shewana3_2683 at 3208.448 kb on - strand, within Shewana3_2683 at 3208.448 kb on - strand, within Shewana3_2683 at 3208.601 kb on + strand, within Shewana3_2683 at 3208.661 kb on - strand, within Shewana3_2683 at 3208.699 kb on - strand, within Shewana3_2683 at 3208.796 kb on - strand, within Shewana3_2683 at 3208.813 kb on + strand, within Shewana3_2683
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 3,205,740 + Shewana3_2681 0.54 +1.0 3,205,748 - Shewana3_2681 0.55 -1.4 3,205,988 + Shewana3_2681 0.71 -0.0 3,206,076 + Shewana3_2681 0.77 -1.5 3,206,298 - -1.0 3,206,302 + -1.0 3,206,310 - -0.3 3,206,396 - +0.5 3,206,681 - +0.3 3,206,793 + Shewana3_2682 0.11 -1.2 3,207,200 - Shewana3_2682 0.44 +1.2 3,207,342 - Shewana3_2682 0.55 +1.4 3,207,532 + Shewana3_2682 0.71 -0.0 3,207,539 - Shewana3_2682 0.71 +0.6 3,207,551 + Shewana3_2682 0.72 -1.0 3,207,584 + Shewana3_2682 0.75 +0.4 3,207,613 - Shewana3_2682 0.77 -0.1 3,207,644 + Shewana3_2682 0.80 +2.0 3,207,673 - Shewana3_2682 0.82 +1.1 3,207,692 + +2.0 3,207,780 - -0.1 3,208,019 + -1.0 3,208,021 + -1.5 3,208,261 - Shewana3_2683 0.13 +0.3 3,208,332 - Shewana3_2683 0.20 +0.9 3,208,435 + Shewana3_2683 0.30 -1.2 3,208,448 - Shewana3_2683 0.32 -0.7 3,208,448 - Shewana3_2683 0.32 -2.2 3,208,601 + Shewana3_2683 0.47 +0.1 3,208,661 - Shewana3_2683 0.53 +1.3 3,208,699 - Shewana3_2683 0.57 +0.1 3,208,796 - Shewana3_2683 0.66 +0.2 3,208,813 + Shewana3_2683 0.68 -0.1
Or see this region's nucleotide sequence