Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2605
Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,108,390 | - | -1.6 | |||
3,108,532 | - | +0.4 | |||
3,108,596 | + | Shewana3_2604 | 0.12 | +0.7 | |
3,108,604 | - | Shewana3_2604 | 0.14 | +0.5 | |
3,108,625 | - | Shewana3_2604 | 0.17 | -0.1 | |
3,108,635 | + | Shewana3_2604 | 0.18 | -0.0 | |
3,108,706 | - | Shewana3_2604 | 0.28 | -0.9 | |
3,108,762 | - | Shewana3_2604 | 0.36 | +0.2 | |
3,108,816 | + | Shewana3_2604 | 0.44 | -1.7 | |
3,109,116 | - | Shewana3_2604 | 0.87 | -0.7 | |
3,109,221 | + | +1.0 | |||
3,109,551 | - | Shewana3_2605 | 0.19 | +0.6 | |
3,109,589 | - | Shewana3_2605 | 0.23 | -1.3 | |
3,109,719 | - | Shewana3_2605 | 0.37 | +0.5 | |
3,109,722 | + | Shewana3_2605 | 0.37 | -1.2 | |
3,109,741 | - | Shewana3_2605 | 0.39 | +3.3 | |
3,109,821 | + | Shewana3_2605 | 0.48 | +0.0 | |
3,109,821 | + | Shewana3_2605 | 0.48 | +0.4 | |
3,109,821 | + | Shewana3_2605 | 0.48 | +0.2 | |
3,109,829 | + | Shewana3_2605 | 0.48 | -0.3 | |
3,109,837 | - | Shewana3_2605 | 0.49 | +0.1 | |
3,109,907 | + | Shewana3_2605 | 0.57 | +0.0 | |
3,109,985 | + | Shewana3_2605 | 0.65 | +2.0 | |
3,110,034 | + | Shewana3_2605 | 0.70 | -0.9 | |
3,110,253 | + | +0.6 | |||
3,110,366 | + | -0.2 | |||
3,110,580 | + | -0.8 |
Or see this region's nucleotide sequence