Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2501
Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,991,880 | - | Shewana3_2500 | 0.74 | +0.0 | |
2,992,183 | + | Shewana3_2500 | 0.87 | +1.0 | |
2,992,199 | - | Shewana3_2500 | 0.88 | +0.5 | |
2,992,344 | - | +1.2 | |||
2,992,388 | - | +1.0 | |||
2,992,509 | - | +0.2 | |||
2,992,738 | - | +0.3 | |||
2,992,879 | + | -1.3 | |||
2,992,904 | - | -2.2 | |||
2,992,980 | + | Shewana3_2501 | 0.19 | +0.0 | |
2,993,014 | - | Shewana3_2501 | 0.24 | -0.9 | |
2,993,160 | + | Shewana3_2501 | 0.45 | -0.4 | |
2,993,380 | + | Shewana3_2501 | 0.78 | -1.6 | |
2,993,380 | + | Shewana3_2501 | 0.78 | -0.5 | |
2,993,445 | - | Shewana3_2501 | 0.87 | +0.0 | |
2,993,452 | + | Shewana3_2501 | 0.88 | +0.1 | |
2,993,524 | + | +0.9 | |||
2,993,974 | + | Shewana3_2502 | 0.33 | -1.2 | |
2,994,030 | - | Shewana3_2502 | 0.37 | +0.1 | |
2,994,101 | + | Shewana3_2502 | 0.43 | +0.4 | |
2,994,112 | - | Shewana3_2502 | 0.44 | -0.8 | |
2,994,168 | - | Shewana3_2502 | 0.49 | -0.1 | |
2,994,427 | - | Shewana3_2502 | 0.71 | +0.6 |
Or see this region's nucleotide sequence