Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rbgA and Shewana3_2396 are separated by 299 nucleotides Shewana3_2396 and Shewana3_2397 are separated by 286 nucleotides Shewana3_2397 and Shewana3_2398 are separated by 84 nucleotides
Shewana3_2395: rbgA - ribosomal biogenesis GTPase (RefSeq), at 2,874,207 to 2,875,148
rbgA
Shewana3_2396: Shewana3_2396 - hypothetical protein (RefSeq), at 2,875,448 to 2,875,888
_2396
Shewana3_2397: Shewana3_2397 - hypothetical protein (RefSeq), at 2,876,175 to 2,876,732
_2397
Shewana3_2398: Shewana3_2398 - hypothetical protein (RefSeq), at 2,876,817 to 2,877,422
_2398
Position (kb)
2875
2876 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2875.417 kb on - strand at 2875.495 kb on - strand, within Shewana3_2396 at 2875.544 kb on - strand, within Shewana3_2396 at 2875.634 kb on + strand, within Shewana3_2396 at 2875.677 kb on - strand, within Shewana3_2396 at 2875.940 kb on - strand at 2876.081 kb on + strand at 2876.286 kb on + strand, within Shewana3_2397 at 2876.546 kb on + strand, within Shewana3_2397 at 2876.705 kb on + strand at 2876.778 kb on - strand at 2876.808 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 2,875,417 - -1.9 2,875,495 - Shewana3_2396 0.11 -0.6 2,875,544 - Shewana3_2396 0.22 +0.5 2,875,634 + Shewana3_2396 0.42 +1.1 2,875,677 - Shewana3_2396 0.52 -0.5 2,875,940 - -0.7 2,876,081 + +1.8 2,876,286 + Shewana3_2397 0.20 +1.1 2,876,546 + Shewana3_2397 0.66 -2.3 2,876,705 + -0.1 2,876,778 - +0.1 2,876,808 - -0.7
Or see this region's nucleotide sequence