Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2267
Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,728,241 | + | Shewana3_2266 | 0.54 | +1.6 | |
2,728,398 | + | Shewana3_2266 | 0.66 | +1.9 | |
2,728,524 | + | Shewana3_2266 | 0.75 | +0.2 | |
2,728,625 | + | Shewana3_2266 | 0.82 | +2.0 | |
2,728,655 | + | Shewana3_2266 | 0.84 | +1.7 | |
2,728,715 | + | Shewana3_2266 | 0.89 | +1.5 | |
2,728,830 | + | +1.7 | |||
2,729,019 | - | +0.6 | |||
2,729,094 | - | +1.6 | |||
2,729,438 | + | Shewana3_2267 | 0.23 | +1.7 | |
2,729,540 | - | Shewana3_2267 | 0.29 | -0.3 | |
2,729,605 | + | Shewana3_2267 | 0.32 | -0.1 | |
2,729,822 | - | Shewana3_2267 | 0.44 | +0.2 | |
2,729,936 | + | Shewana3_2267 | 0.50 | -0.8 | |
2,730,026 | - | Shewana3_2267 | 0.55 | -2.5 | |
2,730,026 | - | Shewana3_2267 | 0.55 | -1.3 | |
2,730,206 | + | Shewana3_2267 | 0.64 | -0.0 | |
2,730,214 | - | Shewana3_2267 | 0.65 | -0.2 | |
2,730,592 | + | Shewana3_2267 | 0.85 | -1.2 | |
2,730,593 | - | Shewana3_2267 | 0.85 | +1.1 | |
2,730,597 | + | Shewana3_2267 | 0.85 | -0.3 | |
2,730,605 | - | Shewana3_2267 | 0.85 | +0.3 | |
2,730,612 | + | Shewana3_2267 | 0.86 | -0.9 | |
2,730,733 | - | -1.7 | |||
2,731,020 | - | +0.2 | |||
2,731,664 | + | Shewana3_2268 | 0.25 | +0.0 | |
2,731,667 | - | Shewana3_2268 | 0.25 | -0.1 | |
2,731,787 | + | Shewana3_2268 | 0.35 | -0.1 |
Or see this region's nucleotide sequence