Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_2253 and Shewana3_2254 are separated by 349 nucleotides Shewana3_2254 and Shewana3_2255 are separated by 160 nucleotides Shewana3_2255 and Shewana3_2256 are separated by 23 nucleotides Shewana3_2256 and Shewana3_2257 are separated by 32 nucleotides
Shewana3_2253: Shewana3_2253 - hypothetical protein (RefSeq), at 2,715,068 to 2,715,784
_2253
Shewana3_2254: Shewana3_2254 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,716,134 to 2,717,771
_2254
Shewana3_2255: Shewana3_2255 - hypothetical protein (RefSeq), at 2,717,932 to 2,718,327
_2255
Shewana3_2256: Shewana3_2256 - HPr family phosphocarrier protein (RefSeq), at 2,718,351 to 2,718,608
_2256
Shewana3_2257: Shewana3_2257 - phosphoenolpyruvate--protein phosphotransferase (RefSeq), at 2,718,641 to 2,720,344
_2257
Position (kb)
2716
2717
2718 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2715.163 kb on - strand, within Shewana3_2253 at 2715.183 kb on + strand, within Shewana3_2253 at 2715.183 kb on + strand, within Shewana3_2253 at 2715.321 kb on - strand, within Shewana3_2253 at 2715.658 kb on + strand, within Shewana3_2253 at 2715.658 kb on + strand, within Shewana3_2253 at 2715.658 kb on + strand, within Shewana3_2253 at 2716.034 kb on - strand at 2716.036 kb on + strand at 2716.294 kb on - strand at 2716.527 kb on + strand, within Shewana3_2254 at 2716.788 kb on + strand, within Shewana3_2254 at 2716.897 kb on + strand, within Shewana3_2254 at 2717.472 kb on - strand, within Shewana3_2254 at 2717.935 kb on + strand at 2717.935 kb on + strand at 2718.119 kb on + strand, within Shewana3_2255 at 2718.338 kb on + strand at 2718.513 kb on - strand, within Shewana3_2256 at 2718.513 kb on - strand, within Shewana3_2256 at 2718.566 kb on - strand, within Shewana3_2256 at 2718.704 kb on - strand at 2718.704 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 2,715,163 - Shewana3_2253 0.13 +1.0 2,715,183 + Shewana3_2253 0.16 -0.6 2,715,183 + Shewana3_2253 0.16 +0.2 2,715,321 - Shewana3_2253 0.35 +0.6 2,715,658 + Shewana3_2253 0.82 -1.8 2,715,658 + Shewana3_2253 0.82 +1.2 2,715,658 + Shewana3_2253 0.82 -1.3 2,716,034 - -0.4 2,716,036 + +2.2 2,716,294 - +0.9 2,716,527 + Shewana3_2254 0.24 +0.2 2,716,788 + Shewana3_2254 0.40 -0.8 2,716,897 + Shewana3_2254 0.47 +0.2 2,717,472 - Shewana3_2254 0.82 +2.2 2,717,935 + +0.6 2,717,935 + +0.3 2,718,119 + Shewana3_2255 0.47 +0.5 2,718,338 + -0.9 2,718,513 - Shewana3_2256 0.63 -0.1 2,718,513 - Shewana3_2256 0.63 -0.5 2,718,566 - Shewana3_2256 0.83 -1.2 2,718,704 - +1.2 2,718,704 - +0.7
Or see this region's nucleotide sequence