Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_2222 and Shewana3_2223 are separated by 274 nucleotides Shewana3_2223 and Shewana3_2224 are separated by 123 nucleotides
Shewana3_2222: Shewana3_2222 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,669,269 to 2,670,405
_2222
Shewana3_2223: Shewana3_2223 - CoA-binding domain-containing protein (RefSeq), at 2,670,680 to 2,673,394
_2223
Shewana3_2224: Shewana3_2224 - EmrB/QacA family drug resistance transporter (RefSeq), at 2,673,518 to 2,675,098
_2224
Position (kb)
2670
2671
2672
2673
2674 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2669.890 kb on - strand, within Shewana3_2222 at 2669.946 kb on - strand, within Shewana3_2222 at 2670.215 kb on - strand, within Shewana3_2222 at 2670.244 kb on + strand, within Shewana3_2222 at 2671.193 kb on + strand, within Shewana3_2223 at 2671.267 kb on - strand, within Shewana3_2223 at 2671.638 kb on + strand, within Shewana3_2223 at 2671.661 kb on - strand, within Shewana3_2223 at 2671.711 kb on - strand, within Shewana3_2223 at 2671.724 kb on + strand, within Shewana3_2223 at 2672.022 kb on - strand, within Shewana3_2223 at 2672.149 kb on + strand, within Shewana3_2223 at 2672.151 kb on - strand, within Shewana3_2223 at 2672.204 kb on - strand, within Shewana3_2223 at 2672.337 kb on + strand, within Shewana3_2223 at 2672.402 kb on - strand, within Shewana3_2223 at 2672.751 kb on - strand, within Shewana3_2223 at 2673.102 kb on + strand, within Shewana3_2223 at 2673.183 kb on + strand at 2673.183 kb on + strand at 2673.243 kb on + strand at 2673.251 kb on - strand at 2673.291 kb on + strand at 2673.516 kb on + strand at 2673.543 kb on + strand at 2673.551 kb on - strand at 2673.650 kb on + strand at 2673.650 kb on + strand at 2673.657 kb on + strand at 2673.658 kb on - strand at 2673.662 kb on + strand at 2673.663 kb on - strand at 2673.780 kb on - strand, within Shewana3_2224 at 2673.780 kb on - strand, within Shewana3_2224 at 2673.799 kb on + strand, within Shewana3_2224 at 2673.799 kb on + strand, within Shewana3_2224 at 2673.799 kb on + strand, within Shewana3_2224 at 2673.807 kb on - strand, within Shewana3_2224 at 2673.889 kb on - strand, within Shewana3_2224 at 2673.913 kb on - strand, within Shewana3_2224 at 2674.123 kb on - strand, within Shewana3_2224 at 2674.139 kb on - strand, within Shewana3_2224
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 2,669,890 - Shewana3_2222 0.55 -0.7 2,669,946 - Shewana3_2222 0.60 +1.3 2,670,215 - Shewana3_2222 0.83 +1.3 2,670,244 + Shewana3_2222 0.86 +1.3 2,671,193 + Shewana3_2223 0.19 -1.2 2,671,267 - Shewana3_2223 0.22 -0.7 2,671,638 + Shewana3_2223 0.35 +0.3 2,671,661 - Shewana3_2223 0.36 +0.3 2,671,711 - Shewana3_2223 0.38 -0.0 2,671,724 + Shewana3_2223 0.38 -0.3 2,672,022 - Shewana3_2223 0.49 -0.9 2,672,149 + Shewana3_2223 0.54 -0.0 2,672,151 - Shewana3_2223 0.54 +0.6 2,672,204 - Shewana3_2223 0.56 -0.3 2,672,337 + Shewana3_2223 0.61 -0.6 2,672,402 - Shewana3_2223 0.63 +0.7 2,672,751 - Shewana3_2223 0.76 -1.6 2,673,102 + Shewana3_2223 0.89 -0.7 2,673,183 + +0.7 2,673,183 + -1.4 2,673,243 + -1.2 2,673,251 - -0.3 2,673,291 + +0.1 2,673,516 + -1.4 2,673,543 + -0.7 2,673,551 - -0.5 2,673,650 + -1.8 2,673,650 + -1.6 2,673,657 + -0.0 2,673,658 - +0.4 2,673,662 + -0.3 2,673,663 - -0.1 2,673,780 - Shewana3_2224 0.17 +0.9 2,673,780 - Shewana3_2224 0.17 +1.8 2,673,799 + Shewana3_2224 0.18 +0.3 2,673,799 + Shewana3_2224 0.18 -0.3 2,673,799 + Shewana3_2224 0.18 -0.5 2,673,807 - Shewana3_2224 0.18 +0.3 2,673,889 - Shewana3_2224 0.23 -1.8 2,673,913 - Shewana3_2224 0.25 -0.2 2,674,123 - Shewana3_2224 0.38 -0.3 2,674,139 - Shewana3_2224 0.39 +0.4
Or see this region's nucleotide sequence