Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1959
Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,332,185 | - | Shewana3_1958 | 0.73 | +0.3 | |
2,332,301 | - | Shewana3_1958 | 0.77 | -0.3 | |
2,332,438 | - | Shewana3_1958 | 0.82 | +0.3 | |
2,332,547 | + | Shewana3_1958 | 0.87 | +1.2 | |
2,332,758 | + | +0.5 | |||
2,332,835 | + | +1.6 | |||
2,333,000 | - | +0.3 | |||
2,333,194 | - | Shewana3_1959 | 0.16 | +1.3 | |
2,333,213 | + | Shewana3_1959 | 0.19 | -2.2 | |
2,333,291 | + | Shewana3_1959 | 0.30 | +1.3 | |
2,333,432 | + | Shewana3_1959 | 0.51 | -0.7 | |
2,333,432 | + | Shewana3_1959 | 0.51 | -0.7 | |
2,333,705 | + | -1.2 | |||
2,333,901 | + | +0.3 | |||
2,334,136 | + | Shewana3_1960 | 0.17 | +1.4 | |
2,334,183 | + | Shewana3_1960 | 0.21 | -0.1 | |
2,334,238 | + | Shewana3_1960 | 0.26 | +2.6 | |
2,334,277 | - | Shewana3_1960 | 0.29 | +2.3 | |
2,334,285 | - | Shewana3_1960 | 0.30 | +2.3 | |
2,334,357 | + | Shewana3_1960 | 0.36 | +0.3 | |
2,334,632 | + | Shewana3_1960 | 0.61 | -1.3 |
Or see this region's nucleotide sequence