Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_1832 and Shewana3_1833 overlap by 13 nucleotides Shewana3_1833 and Shewana3_1834 are separated by 93 nucleotides
Shewana3_1832: Shewana3_1832 - DNA-repair protein (RefSeq), at 2,173,136 to 2,174,392
_1832
Shewana3_1833: Shewana3_1833 - putative prophage repressor (RefSeq), at 2,174,380 to 2,175,204
_1833
Shewana3_1834: Shewana3_1834 - hypothetical protein (RefSeq), at 2,175,298 to 2,175,942
_1834
Position (kb)
2173
2174
2175 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2172.146 kb on + strand at 2172.224 kb on - strand at 2172.283 kb on + strand at 2172.336 kb on + strand at 2172.348 kb on - strand at 2172.383 kb on + strand at 2172.401 kb on + strand at 2172.401 kb on + strand at 2172.409 kb on - strand at 2172.508 kb on + strand at 2172.508 kb on + strand at 2172.516 kb on - strand at 2172.574 kb on + strand at 2172.587 kb on - strand at 2172.760 kb on + strand at 2173.051 kb on + strand at 2173.171 kb on - strand at 2173.175 kb on + strand at 2173.185 kb on - strand at 2173.360 kb on + strand, within Shewana3_1832 at 2173.547 kb on + strand, within Shewana3_1832 at 2173.640 kb on - strand, within Shewana3_1832 at 2173.965 kb on + strand, within Shewana3_1832 at 2174.402 kb on - strand at 2174.720 kb on + strand, within Shewana3_1833 at 2174.735 kb on - strand, within Shewana3_1833 at 2174.786 kb on + strand, within Shewana3_1833 at 2175.004 kb on - strand, within Shewana3_1833 at 2175.028 kb on - strand, within Shewana3_1833 at 2175.028 kb on - strand, within Shewana3_1833 at 2175.048 kb on - strand, within Shewana3_1833
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 2,172,146 + +1.2 2,172,224 - +0.6 2,172,283 + +1.1 2,172,336 + +0.6 2,172,348 - -2.8 2,172,383 + +0.4 2,172,401 + -1.6 2,172,401 + -1.1 2,172,409 - +0.2 2,172,508 + +0.6 2,172,508 + +1.4 2,172,516 - -0.6 2,172,574 + +0.3 2,172,587 - +2.2 2,172,760 + -0.4 2,173,051 + +0.6 2,173,171 - +0.2 2,173,175 + +2.2 2,173,185 - +0.9 2,173,360 + Shewana3_1832 0.18 -0.8 2,173,547 + Shewana3_1832 0.33 -0.4 2,173,640 - Shewana3_1832 0.40 -0.1 2,173,965 + Shewana3_1832 0.66 -1.9 2,174,402 - +0.5 2,174,720 + Shewana3_1833 0.41 +0.2 2,174,735 - Shewana3_1833 0.43 -0.8 2,174,786 + Shewana3_1833 0.49 -1.0 2,175,004 - Shewana3_1833 0.76 +0.1 2,175,028 - Shewana3_1833 0.79 -0.5 2,175,028 - Shewana3_1833 0.79 +1.8 2,175,048 - Shewana3_1833 0.81 -0.9
Or see this region's nucleotide sequence