Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_1823 and Shewana3_1824 are separated by 14 nucleotides Shewana3_1824 and Shewana3_1825 are separated by 609 nucleotides
Shewana3_1823: Shewana3_1823 - hypothetical protein (RefSeq), at 2,156,003 to 2,157,856
_1823
Shewana3_1824: Shewana3_1824 - glutathione synthase (RefSeq), at 2,157,871 to 2,159,871
_1824
Shewana3_1825: Shewana3_1825 - ATPase-like protein (RefSeq), at 2,160,481 to 2,163,678
_1825
Position (kb)
2157
2158
2159
2160 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2156.909 kb on + strand, within Shewana3_1823 at 2156.995 kb on + strand, within Shewana3_1823 at 2157.019 kb on + strand, within Shewana3_1823 at 2157.224 kb on + strand, within Shewana3_1823 at 2157.290 kb on + strand, within Shewana3_1823 at 2157.342 kb on - strand, within Shewana3_1823 at 2157.436 kb on + strand, within Shewana3_1823 at 2157.672 kb on - strand at 2157.672 kb on - strand at 2157.688 kb on + strand at 2157.926 kb on - strand at 2158.197 kb on + strand, within Shewana3_1824 at 2158.281 kb on + strand, within Shewana3_1824 at 2158.547 kb on - strand, within Shewana3_1824 at 2158.622 kb on + strand, within Shewana3_1824 at 2158.766 kb on + strand, within Shewana3_1824 at 2158.774 kb on - strand, within Shewana3_1824 at 2158.813 kb on + strand, within Shewana3_1824 at 2158.832 kb on - strand, within Shewana3_1824 at 2158.877 kb on - strand, within Shewana3_1824 at 2159.048 kb on + strand, within Shewana3_1824 at 2159.048 kb on + strand, within Shewana3_1824 at 2159.056 kb on - strand, within Shewana3_1824 at 2159.091 kb on - strand, within Shewana3_1824 at 2159.165 kb on + strand, within Shewana3_1824 at 2159.165 kb on + strand at 2159.165 kb on + strand, within Shewana3_1824 at 2159.339 kb on + strand, within Shewana3_1824 at 2159.347 kb on - strand, within Shewana3_1824 at 2159.347 kb on - strand, within Shewana3_1824 at 2159.544 kb on - strand, within Shewana3_1824 at 2159.571 kb on - strand, within Shewana3_1824 at 2159.581 kb on - strand, within Shewana3_1824 at 2159.626 kb on + strand, within Shewana3_1824 at 2159.694 kb on - strand at 2159.744 kb on + strand at 2159.744 kb on + strand at 2159.794 kb on + strand at 2159.861 kb on + strand at 2160.170 kb on - strand at 2160.443 kb on - strand at 2160.446 kb on + strand at 2160.452 kb on + strand at 2160.583 kb on + strand at 2160.591 kb on - strand at 2160.671 kb on - strand at 2160.671 kb on - strand at 2160.685 kb on + strand at 2160.685 kb on + strand at 2160.685 kb on + strand at 2160.685 kb on + strand at 2160.693 kb on - strand at 2160.693 kb on - strand at 2160.693 kb on - strand at 2160.777 kb on - strand at 2160.804 kb on - strand, within Shewana3_1825 at 2160.848 kb on + strand, within Shewana3_1825
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 2,156,909 + Shewana3_1823 0.49 -0.8 2,156,995 + Shewana3_1823 0.54 -0.1 2,157,019 + Shewana3_1823 0.55 +0.6 2,157,224 + Shewana3_1823 0.66 -1.0 2,157,290 + Shewana3_1823 0.69 +2.2 2,157,342 - Shewana3_1823 0.72 -0.3 2,157,436 + Shewana3_1823 0.77 +1.2 2,157,672 - -1.7 2,157,672 - +0.6 2,157,688 + +0.6 2,157,926 - +0.4 2,158,197 + Shewana3_1824 0.16 +0.6 2,158,281 + Shewana3_1824 0.20 +0.2 2,158,547 - Shewana3_1824 0.34 -0.0 2,158,622 + Shewana3_1824 0.38 +2.2 2,158,766 + Shewana3_1824 0.45 +2.2 2,158,774 - Shewana3_1824 0.45 -1.0 2,158,813 + Shewana3_1824 0.47 +0.6 2,158,832 - Shewana3_1824 0.48 -0.8 2,158,877 - Shewana3_1824 0.50 +0.6 2,159,048 + Shewana3_1824 0.59 +2.2 2,159,048 + Shewana3_1824 0.59 +0.6 2,159,056 - Shewana3_1824 0.59 +0.7 2,159,091 - Shewana3_1824 0.61 -0.3 2,159,165 + Shewana3_1824 0.65 +1.2 2,159,165 + +2.2 2,159,165 + Shewana3_1824 0.65 +0.2 2,159,339 + Shewana3_1824 0.73 +2.2 2,159,347 - Shewana3_1824 0.74 -0.5 2,159,347 - Shewana3_1824 0.74 +0.6 2,159,544 - Shewana3_1824 0.84 -0.1 2,159,571 - Shewana3_1824 0.85 +1.4 2,159,581 - Shewana3_1824 0.85 -0.5 2,159,626 + Shewana3_1824 0.88 -0.4 2,159,694 - -0.1 2,159,744 + -0.4 2,159,744 + -1.3 2,159,794 + -2.1 2,159,861 + -1.1 2,160,170 - +1.6 2,160,443 - +0.6 2,160,446 + +0.5 2,160,452 + -0.6 2,160,583 + +1.2 2,160,591 - +0.7 2,160,671 - +1.2 2,160,671 - -0.8 2,160,685 + +0.8 2,160,685 + +0.3 2,160,685 + -0.0 2,160,685 + +1.0 2,160,693 - +0.6 2,160,693 - +0.6 2,160,693 - -0.8 2,160,777 - +0.4 2,160,804 - Shewana3_1825 0.10 +2.2 2,160,848 + Shewana3_1825 0.11 +1.5
Or see this region's nucleotide sequence