Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_1723 and Shewana3_1724 overlap by 10 nucleotides Shewana3_1724 and Shewana3_1725 are separated by 164 nucleotides Shewana3_1725 and Shewana3_1726 are separated by 156 nucleotides
Shewana3_1723: Shewana3_1723 - ATPase domain-containing protein (RefSeq), at 2,026,085 to 2,027,434
_1723
Shewana3_1724: Shewana3_1724 - two component transcriptional regulator (RefSeq), at 2,027,425 to 2,028,108
_1724
Shewana3_1725: Shewana3_1725 - hypothetical protein (RefSeq), at 2,028,273 to 2,028,620
_1725
Shewana3_1726: Shewana3_1726 - sodium:dicarboxylate symporter (RefSeq), at 2,028,777 to 2,030,090
_1726
Position (kb)
2028
2029 Strain fitness (log2 ratio)
-1
0
1 at 2027.472 kb on + strand at 2027.480 kb on - strand at 2027.480 kb on - strand at 2027.531 kb on - strand, within Shewana3_1724 at 2027.724 kb on - strand, within Shewana3_1724 at 2028.118 kb on - strand at 2028.212 kb on - strand at 2028.421 kb on - strand, within Shewana3_1725 at 2028.491 kb on - strand, within Shewana3_1725 at 2029.073 kb on - strand, within Shewana3_1726 at 2029.184 kb on - strand, within Shewana3_1726 at 2029.243 kb on - strand, within Shewana3_1726 at 2029.350 kb on - strand, within Shewana3_1726 at 2029.352 kb on + strand, within Shewana3_1726 at 2029.372 kb on - strand, within Shewana3_1726 at 2029.388 kb on - strand, within Shewana3_1726
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 2,027,472 + +0.6 2,027,480 - +1.2 2,027,480 - -1.4 2,027,531 - Shewana3_1724 0.15 -0.2 2,027,724 - Shewana3_1724 0.44 -0.7 2,028,118 - +0.2 2,028,212 - -0.5 2,028,421 - Shewana3_1725 0.43 +0.7 2,028,491 - Shewana3_1725 0.63 +1.4 2,029,073 - Shewana3_1726 0.23 +0.8 2,029,184 - Shewana3_1726 0.31 +1.6 2,029,243 - Shewana3_1726 0.35 +0.8 2,029,350 - Shewana3_1726 0.44 +0.1 2,029,352 + Shewana3_1726 0.44 +0.6 2,029,372 - Shewana3_1726 0.45 +0.4 2,029,388 - Shewana3_1726 0.46 +1.0
Or see this region's nucleotide sequence