Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_1507 and Shewana3_1508 are separated by 84 nucleotides Shewana3_1508 and Shewana3_1509 overlap by 4 nucleotides Shewana3_1509 and Shewana3_1510 overlap by 1 nucleotides
Shewana3_1507: Shewana3_1507 - TonB-dependent siderophore receptor (RefSeq), at 1,753,615 to 1,755,828
_1507
Shewana3_1508: Shewana3_1508 - IucA/IucC family protein (RefSeq), at 1,755,913 to 1,757,808
_1508
Shewana3_1509: Shewana3_1509 - siderophore biosynthesis protein, putative (RefSeq), at 1,757,805 to 1,758,470
_1509
Shewana3_1510: Shewana3_1510 - siderophore biosynthesis protein (RefSeq), at 1,758,470 to 1,759,960
_1510
Position (kb)
1755
1756
1757
1758 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1755.198 kb on + strand, within Shewana3_1507 at 1755.348 kb on + strand, within Shewana3_1507 at 1755.356 kb on - strand, within Shewana3_1507 at 1755.726 kb on + strand at 1755.772 kb on - strand at 1755.883 kb on + strand at 1755.889 kb on + strand at 1755.908 kb on - strand at 1755.918 kb on - strand at 1755.957 kb on + strand at 1755.971 kb on - strand at 1756.303 kb on + strand, within Shewana3_1508 at 1756.336 kb on + strand, within Shewana3_1508 at 1756.344 kb on - strand, within Shewana3_1508 at 1756.506 kb on + strand, within Shewana3_1508 at 1756.762 kb on - strand, within Shewana3_1508 at 1756.790 kb on + strand, within Shewana3_1508 at 1756.857 kb on - strand, within Shewana3_1508 at 1757.079 kb on - strand, within Shewana3_1508 at 1757.362 kb on + strand, within Shewana3_1508 at 1757.375 kb on + strand, within Shewana3_1508 at 1757.390 kb on - strand, within Shewana3_1508 at 1757.490 kb on - strand, within Shewana3_1508 at 1757.699 kb on - strand at 1757.816 kb on + strand at 1757.872 kb on + strand, within Shewana3_1509 at 1758.090 kb on - strand, within Shewana3_1509 at 1758.147 kb on + strand, within Shewana3_1509 at 1758.178 kb on + strand, within Shewana3_1509 at 1758.178 kb on + strand, within Shewana3_1509 at 1758.186 kb on - strand, within Shewana3_1509 at 1758.435 kb on - strand at 1758.664 kb on - strand, within Shewana3_1510 at 1758.764 kb on - strand, within Shewana3_1510 at 1758.774 kb on - strand, within Shewana3_1510
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 1,755,198 + Shewana3_1507 0.71 -0.9 1,755,348 + Shewana3_1507 0.78 -2.1 1,755,356 - Shewana3_1507 0.79 +0.1 1,755,726 + -2.5 1,755,772 - +2.0 1,755,883 + -0.2 1,755,889 + -1.0 1,755,908 - -0.6 1,755,918 - -0.6 1,755,957 + -0.6 1,755,971 - -0.8 1,756,303 + Shewana3_1508 0.21 -0.4 1,756,336 + Shewana3_1508 0.22 -0.2 1,756,344 - Shewana3_1508 0.23 -0.4 1,756,506 + Shewana3_1508 0.31 -0.5 1,756,762 - Shewana3_1508 0.45 +0.6 1,756,790 + Shewana3_1508 0.46 -2.1 1,756,857 - Shewana3_1508 0.50 -1.2 1,757,079 - Shewana3_1508 0.61 +1.0 1,757,362 + Shewana3_1508 0.76 -1.6 1,757,375 + Shewana3_1508 0.77 -0.7 1,757,390 - Shewana3_1508 0.78 -0.6 1,757,490 - Shewana3_1508 0.83 -0.7 1,757,699 - -1.6 1,757,816 + -0.4 1,757,872 + Shewana3_1509 0.10 +0.1 1,758,090 - Shewana3_1509 0.43 -0.4 1,758,147 + Shewana3_1509 0.51 +2.0 1,758,178 + Shewana3_1509 0.56 -0.0 1,758,178 + Shewana3_1509 0.56 -0.6 1,758,186 - Shewana3_1509 0.57 -1.7 1,758,435 - -0.6 1,758,664 - Shewana3_1510 0.13 +0.4 1,758,764 - Shewana3_1510 0.20 -1.2 1,758,774 - Shewana3_1510 0.20 -2.7
Or see this region's nucleotide sequence