Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_1504 and Shewana3_1505 overlap by 1 nucleotides Shewana3_1505 and Shewana3_1506 are separated by 160 nucleotides Shewana3_1506 and Shewana3_1507 are separated by 88 nucleotides
Shewana3_1504: Shewana3_1504 - YciI-like protein (RefSeq), at 1,751,487 to 1,751,786
_1504
Shewana3_1505: Shewana3_1505 - intracellular septation protein A (RefSeq), at 1,751,786 to 1,752,331
_1505
Shewana3_1506: Shewana3_1506 - ferric iron reductase (RefSeq), at 1,752,492 to 1,753,526
_1506
Shewana3_1507: Shewana3_1507 - TonB-dependent siderophore receptor (RefSeq), at 1,753,615 to 1,755,828
_1507
Position (kb)
1752
1753
1754 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1751.568 kb on + strand, within Shewana3_1504 at 1751.576 kb on - strand, within Shewana3_1504 at 1751.576 kb on - strand, within Shewana3_1504 at 1751.576 kb on - strand, within Shewana3_1504 at 1751.666 kb on - strand, within Shewana3_1504 at 1752.398 kb on + strand at 1752.490 kb on + strand at 1752.498 kb on - strand at 1752.498 kb on - strand at 1752.498 kb on - strand at 1752.657 kb on - strand, within Shewana3_1506 at 1752.772 kb on + strand, within Shewana3_1506 at 1753.022 kb on + strand, within Shewana3_1506 at 1753.074 kb on + strand, within Shewana3_1506 at 1753.110 kb on + strand, within Shewana3_1506 at 1753.123 kb on + strand, within Shewana3_1506 at 1753.131 kb on - strand, within Shewana3_1506 at 1753.215 kb on - strand, within Shewana3_1506 at 1753.429 kb on - strand at 1753.497 kb on + strand at 1753.600 kb on + strand at 1753.797 kb on - strand at 1753.810 kb on + strand at 1753.818 kb on - strand at 1754.041 kb on + strand, within Shewana3_1507 at 1754.098 kb on + strand, within Shewana3_1507 at 1754.110 kb on - strand, within Shewana3_1507 at 1754.157 kb on + strand, within Shewana3_1507 at 1754.252 kb on - strand, within Shewana3_1507 at 1754.349 kb on + strand, within Shewana3_1507
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 1,751,568 + Shewana3_1504 0.27 -1.2 1,751,576 - Shewana3_1504 0.30 +0.8 1,751,576 - Shewana3_1504 0.30 +1.2 1,751,576 - Shewana3_1504 0.30 -1.0 1,751,666 - Shewana3_1504 0.60 +1.0 1,752,398 + +0.7 1,752,490 + +0.9 1,752,498 - -0.1 1,752,498 - +0.1 1,752,498 - +1.3 1,752,657 - Shewana3_1506 0.16 -2.0 1,752,772 + Shewana3_1506 0.27 -0.6 1,753,022 + Shewana3_1506 0.51 +0.7 1,753,074 + Shewana3_1506 0.56 -0.8 1,753,110 + Shewana3_1506 0.60 -0.9 1,753,123 + Shewana3_1506 0.61 -0.5 1,753,131 - Shewana3_1506 0.62 +2.0 1,753,215 - Shewana3_1506 0.70 -0.6 1,753,429 - -1.2 1,753,497 + -0.7 1,753,600 + -1.0 1,753,797 - -0.1 1,753,810 + -1.5 1,753,818 - -0.2 1,754,041 + Shewana3_1507 0.19 -1.6 1,754,098 + Shewana3_1507 0.22 -0.7 1,754,110 - Shewana3_1507 0.22 -1.9 1,754,157 + Shewana3_1507 0.24 -0.3 1,754,252 - Shewana3_1507 0.29 +0.4 1,754,349 + Shewana3_1507 0.33 -0.1
Or see this region's nucleotide sequence