Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_1500 and Shewana3_1501 are separated by 212 nucleotides Shewana3_1501 and Shewana3_1502 are separated by 128 nucleotides Shewana3_1502 and Shewana3_1503 are separated by 239 nucleotides
Shewana3_1500: Shewana3_1500 - hypothetical protein (RefSeq), at 1,748,713 to 1,749,120
_1500
Shewana3_1501: Shewana3_1501 - GCN5-related N-acetyltransferase (RefSeq), at 1,749,333 to 1,749,875
_1501
Shewana3_1502: Shewana3_1502 - hypothetical protein (RefSeq), at 1,750,004 to 1,750,435
_1502
Shewana3_1503: Shewana3_1503 - exonuclease III (RefSeq), at 1,750,675 to 1,751,487
_1503
Position (kb) 1750
1751 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1749.023 kb on + strand, within Shewana3_1500 at 1749.127 kb on - strand at 1749.151 kb on - strand at 1749.192 kb on + strand at 1749.197 kb on + strand at 1749.220 kb on - strand at 1749.238 kb on + strand at 1749.327 kb on + strand at 1749.327 kb on + strand at 1749.335 kb on - strand at 1749.335 kb on - strand at 1749.462 kb on + strand, within Shewana3_1501 at 1749.463 kb on + strand, within Shewana3_1501 at 1749.463 kb on + strand, within Shewana3_1501 at 1749.463 kb on + strand, within Shewana3_1501 at 1749.529 kb on + strand, within Shewana3_1501 at 1749.529 kb on + strand, within Shewana3_1501 at 1749.529 kb on + strand, within Shewana3_1501 at 1749.537 kb on - strand, within Shewana3_1501 at 1749.553 kb on + strand, within Shewana3_1501 at 1749.700 kb on + strand, within Shewana3_1501 at 1749.759 kb on + strand, within Shewana3_1501 at 1749.759 kb on + strand, within Shewana3_1501 at 1749.793 kb on + strand, within Shewana3_1501 at 1749.805 kb on + strand, within Shewana3_1501 at 1749.812 kb on + strand, within Shewana3_1501 at 1749.813 kb on - strand, within Shewana3_1501 at 1749.876 kb on + strand at 1749.884 kb on + strand at 1750.127 kb on + strand, within Shewana3_1502 at 1750.133 kb on + strand, within Shewana3_1502 at 1750.133 kb on + strand, within Shewana3_1502 at 1750.404 kb on + strand at 1750.514 kb on + strand at 1750.683 kb on + strand at 1750.919 kb on + strand, within Shewana3_1503 at 1750.919 kb on + strand, within Shewana3_1503 at 1750.919 kb on + strand, within Shewana3_1503 at 1750.919 kb on + strand, within Shewana3_1503 at 1750.927 kb on - strand, within Shewana3_1503 at 1751.052 kb on - strand, within Shewana3_1503 at 1751.182 kb on - strand, within Shewana3_1503 at 1751.262 kb on - strand, within Shewana3_1503 at 1751.276 kb on + strand, within Shewana3_1503 at 1751.284 kb on + strand, within Shewana3_1503
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 1,749,023 + Shewana3_1500 0.76 +0.5 1,749,127 - +0.4 1,749,151 - -0.1 1,749,192 + +1.0 1,749,197 + +0.1 1,749,220 - -1.4 1,749,238 + +0.1 1,749,327 + -0.4 1,749,327 + -0.5 1,749,335 - -0.6 1,749,335 - +0.4 1,749,462 + Shewana3_1501 0.24 +1.2 1,749,463 + Shewana3_1501 0.24 -1.8 1,749,463 + Shewana3_1501 0.24 +0.2 1,749,463 + Shewana3_1501 0.24 -0.0 1,749,529 + Shewana3_1501 0.36 +1.2 1,749,529 + Shewana3_1501 0.36 -1.3 1,749,529 + Shewana3_1501 0.36 +1.8 1,749,537 - Shewana3_1501 0.38 +0.4 1,749,553 + Shewana3_1501 0.41 -0.4 1,749,700 + Shewana3_1501 0.68 +0.6 1,749,759 + Shewana3_1501 0.78 -1.9 1,749,759 + Shewana3_1501 0.78 +0.7 1,749,793 + Shewana3_1501 0.85 -0.5 1,749,805 + Shewana3_1501 0.87 -1.0 1,749,812 + Shewana3_1501 0.88 +1.1 1,749,813 - Shewana3_1501 0.88 +0.2 1,749,876 + -1.2 1,749,884 + -0.1 1,750,127 + Shewana3_1502 0.28 +0.6 1,750,133 + Shewana3_1502 0.30 -0.0 1,750,133 + Shewana3_1502 0.30 +1.2 1,750,404 + +0.9 1,750,514 + +0.1 1,750,683 + -1.0 1,750,919 + Shewana3_1503 0.30 -2.9 1,750,919 + Shewana3_1503 0.30 -0.0 1,750,919 + Shewana3_1503 0.30 +1.0 1,750,919 + Shewana3_1503 0.30 -3.2 1,750,927 - Shewana3_1503 0.31 +0.3 1,751,052 - Shewana3_1503 0.46 +1.0 1,751,182 - Shewana3_1503 0.62 -0.6 1,751,262 - Shewana3_1503 0.72 +0.5 1,751,276 + Shewana3_1503 0.74 -0.0 1,751,284 + Shewana3_1503 0.75 +1.0
Or see this region's nucleotide sequence