Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1249
Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,462,517 | + | Shewana3_1248 | 0.78 | -1.9 | |
1,462,806 | + | +0.5 | |||
1,463,036 | + | Shewana3_1249 | 0.12 | -1.1 | |
1,463,042 | - | Shewana3_1249 | 0.13 | -0.9 | |
1,463,198 | - | Shewana3_1249 | 0.39 | -0.8 | |
1,463,260 | + | Shewana3_1249 | 0.49 | +0.4 | |
1,463,318 | + | Shewana3_1249 | 0.59 | +0.0 | |
1,463,356 | - | Shewana3_1249 | 0.65 | -1.0 | |
1,463,615 | - | +1.7 | |||
1,463,809 | - | -0.5 | |||
1,463,957 | - | +0.1 | |||
1,464,029 | + | -0.4 | |||
1,464,133 | + | Shewana3_1250 | 0.13 | +0.2 | |
1,464,138 | + | Shewana3_1250 | 0.13 | -0.3 | |
1,464,141 | - | Shewana3_1250 | 0.13 | -1.0 | |
1,464,187 | + | Shewana3_1250 | 0.16 | -0.8 | |
1,464,240 | - | Shewana3_1250 | 0.20 | -0.6 | |
1,464,243 | - | Shewana3_1250 | 0.20 | -0.5 | |
1,464,261 | + | Shewana3_1250 | 0.21 | +0.1 | |
1,464,287 | + | Shewana3_1250 | 0.23 | +0.2 | |
1,464,469 | + | Shewana3_1250 | 0.34 | +0.3 | |
1,464,502 | - | Shewana3_1250 | 0.37 | -0.6 |
Or see this region's nucleotide sequence