Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0935 and Shewana3_0936 are separated by 155 nucleotides Shewana3_0936 and Shewana3_0937 are separated by 154 nucleotides
Shewana3_0935: Shewana3_0935 - TRAP dicarboxylate transporter- DctP subunit (RefSeq), at 1,094,748 to 1,095,860
_0935
Shewana3_0936: Shewana3_0936 - S-ribosylhomocysteinase (RefSeq), at 1,096,016 to 1,096,525
_0936
Shewana3_0937: Shewana3_0937 - TonB-dependent receptor (RefSeq), at 1,096,680 to 1,098,731
_0937
Position (kb)
1096
1097 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1095.305 kb on - strand, within Shewana3_0935 at 1095.443 kb on - strand, within Shewana3_0935 at 1095.662 kb on - strand, within Shewana3_0935 at 1095.674 kb on + strand, within Shewana3_0935 at 1095.682 kb on - strand, within Shewana3_0935 at 1095.682 kb on - strand, within Shewana3_0935 at 1095.787 kb on - strand at 1095.906 kb on - strand at 1096.085 kb on + strand, within Shewana3_0936 at 1096.320 kb on + strand, within Shewana3_0936 at 1096.419 kb on + strand, within Shewana3_0936 at 1096.427 kb on - strand, within Shewana3_0936 at 1096.458 kb on + strand, within Shewana3_0936 at 1096.458 kb on - strand, within Shewana3_0936 at 1096.463 kb on + strand, within Shewana3_0936 at 1096.519 kb on + strand at 1096.527 kb on - strand at 1096.527 kb on - strand at 1096.527 kb on - strand at 1096.567 kb on - strand at 1096.780 kb on + strand at 1096.846 kb on + strand at 1096.860 kb on - strand at 1097.100 kb on + strand, within Shewana3_0937 at 1097.225 kb on - strand, within Shewana3_0937 at 1097.317 kb on + strand, within Shewana3_0937
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 1,095,305 - Shewana3_0935 0.50 -2.2 1,095,443 - Shewana3_0935 0.62 +0.0 1,095,662 - Shewana3_0935 0.82 -2.5 1,095,674 + Shewana3_0935 0.83 -0.3 1,095,682 - Shewana3_0935 0.84 -0.4 1,095,682 - Shewana3_0935 0.84 -0.2 1,095,787 - +0.7 1,095,906 - +0.7 1,096,085 + Shewana3_0936 0.14 +1.4 1,096,320 + Shewana3_0936 0.60 +0.4 1,096,419 + Shewana3_0936 0.79 +1.0 1,096,427 - Shewana3_0936 0.81 -0.1 1,096,458 + Shewana3_0936 0.87 +0.5 1,096,458 - Shewana3_0936 0.87 -1.5 1,096,463 + Shewana3_0936 0.88 +1.3 1,096,519 + +1.1 1,096,527 - +0.3 1,096,527 - -3.7 1,096,527 - -0.8 1,096,567 - +0.1 1,096,780 + +0.3 1,096,846 + +0.2 1,096,860 - +0.1 1,097,100 + Shewana3_0937 0.20 -0.7 1,097,225 - Shewana3_0937 0.27 -0.9 1,097,317 + Shewana3_0937 0.31 -0.0
Or see this region's nucleotide sequence