Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0890
Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,035,772 | + | mdoD | Shewana3_0889 | 0.52 | +0.1 |
1,035,844 | + | mdoD | Shewana3_0889 | 0.56 | +0.2 |
1,036,012 | + | mdoD | Shewana3_0889 | 0.66 | +0.4 |
1,036,032 | - | mdoD | Shewana3_0889 | 0.67 | -0.7 |
1,036,086 | + | mdoD | Shewana3_0889 | 0.71 | +0.6 |
1,036,141 | - | mdoD | Shewana3_0889 | 0.74 | -2.5 |
1,036,151 | - | mdoD | Shewana3_0889 | 0.75 | -1.1 |
1,036,218 | + | mdoD | Shewana3_0889 | 0.79 | +1.1 |
1,036,218 | + | mdoD | Shewana3_0889 | 0.79 | +0.9 |
1,036,226 | - | mdoD | Shewana3_0889 | 0.79 | +0.2 |
1,036,419 | + | +0.7 | |||
1,036,505 | + | +1.0 | |||
1,036,579 | + | +0.5 | |||
1,036,656 | + | -0.7 | |||
1,036,664 | - | -2.7 | |||
1,036,751 | + | Shewana3_0890 | 0.12 | -1.2 | |
1,036,995 | - | Shewana3_0890 | 0.46 | -0.1 | |
1,037,413 | - | +0.2 | |||
1,037,578 | + | Shewana3_0891 | 0.20 | -0.7 | |
1,037,617 | + | Shewana3_0891 | 0.24 | +0.4 | |
1,037,644 | + | Shewana3_0891 | 0.28 | +0.3 | |
1,037,780 | - | Shewana3_0891 | 0.43 | +0.2 | |
1,038,116 | + | Shewana3_0891 | 0.81 | +1.3 | |
1,038,158 | - | Shewana3_0891 | 0.86 | +0.5 | |
1,038,211 | + | +0.9 | |||
1,038,366 | + | +0.4 |
Or see this region's nucleotide sequence