Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0747 and Shewana3_0748 are separated by 114 nucleotides Shewana3_0748 and Shewana3_0749 are separated by 24 nucleotides Shewana3_0749 and Shewana3_0750 are separated by 66 nucleotides
Shewana3_0747: Shewana3_0747 - diguanylate cyclase (RefSeq), at 866,449 to 868,389
_0747
Shewana3_0748: Shewana3_0748 - phosphoesterase, PA-phosphatase related (RefSeq), at 868,504 to 869,031
_0748
Shewana3_0749: Shewana3_0749 - hypothetical protein (RefSeq), at 869,056 to 869,490
_0749
Shewana3_0750: Shewana3_0750 - malate dehydrogenase (RefSeq), at 869,557 to 871,245
_0750
Position (kb) 869
870 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 868.152 kb on + strand, within Shewana3_0747 at 868.160 kb on - strand, within Shewana3_0747 at 868.230 kb on - strand at 868.325 kb on + strand at 868.627 kb on + strand, within Shewana3_0748 at 868.627 kb on + strand, within Shewana3_0748 at 868.627 kb on + strand, within Shewana3_0748 at 868.689 kb on - strand, within Shewana3_0748 at 868.707 kb on + strand, within Shewana3_0748 at 868.792 kb on - strand, within Shewana3_0748 at 868.956 kb on + strand, within Shewana3_0748 at 868.981 kb on + strand at 869.079 kb on - strand at 869.162 kb on - strand, within Shewana3_0749 at 869.395 kb on + strand, within Shewana3_0749 at 869.473 kb on - strand at 869.484 kb on + strand at 869.642 kb on + strand at 869.661 kb on - strand at 869.843 kb on - strand, within Shewana3_0750 at 869.844 kb on - strand, within Shewana3_0750 at 869.844 kb on - strand, within Shewana3_0750 at 869.929 kb on - strand, within Shewana3_0750 at 870.281 kb on + strand, within Shewana3_0750
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 868,152 + Shewana3_0747 0.88 -0.5 868,160 - Shewana3_0747 0.88 -1.2 868,230 - -0.1 868,325 + +0.4 868,627 + Shewana3_0748 0.23 +0.5 868,627 + Shewana3_0748 0.23 +1.0 868,627 + Shewana3_0748 0.23 +0.1 868,689 - Shewana3_0748 0.35 -0.5 868,707 + Shewana3_0748 0.38 +0.5 868,792 - Shewana3_0748 0.55 +1.2 868,956 + Shewana3_0748 0.86 +0.7 868,981 + +0.7 869,079 - +0.2 869,162 - Shewana3_0749 0.24 +0.2 869,395 + Shewana3_0749 0.78 -1.4 869,473 - -0.4 869,484 + +0.2 869,642 + -2.8 869,661 - -0.2 869,843 - Shewana3_0750 0.17 -0.5 869,844 - Shewana3_0750 0.17 +0.3 869,844 - Shewana3_0750 0.17 -0.1 869,929 - Shewana3_0750 0.22 -0.3 870,281 + Shewana3_0750 0.43 -1.0
Or see this region's nucleotide sequence