Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0326 and fabG are separated by 0 nucleotides fabG and Shewana3_0328 are separated by 125 nucleotides Shewana3_0328 and Shewana3_0329 are separated by 5 nucleotides
Shewana3_0326: Shewana3_0326 - 3-oxoacyl-(acyl carrier protein) synthase II (RefSeq), at 360,461 to 361,714
_0326
Shewana3_0327: fabG - 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq), at 361,715 to 362,440
fabG
Shewana3_0328: Shewana3_0328 - thioester dehydrase family protein (RefSeq), at 362,566 to 363,105
_0328
Shewana3_0329: Shewana3_0329 - 3-oxoacyl-(acyl carrier protein) synthase I (RefSeq), at 363,111 to 364,328
_0329
Position (kb) 362
363
364 Strain fitness (log2 ratio) -2
-1
0
1 at 361.612 kb on + strand at 361.612 kb on + strand at 361.612 kb on + strand at 361.612 kb on + strand at 361.620 kb on - strand at 361.620 kb on - strand at 361.620 kb on - strand at 361.620 kb on - strand at 361.654 kb on - strand at 361.691 kb on + strand at 361.699 kb on - strand at 361.838 kb on - strand, within fabG at 361.845 kb on + strand, within fabG at 361.845 kb on + strand, within fabG at 361.853 kb on - strand, within fabG at 361.930 kb on + strand, within fabG at 361.930 kb on + strand, within fabG at 361.930 kb on + strand, within fabG at 361.930 kb on + strand, within fabG at 361.938 kb on - strand, within fabG at 361.938 kb on - strand, within fabG at 361.938 kb on - strand, within fabG at 361.938 kb on - strand, within fabG at 361.957 kb on + strand, within fabG at 361.968 kb on + strand, within fabG at 361.993 kb on + strand, within fabG at 362.001 kb on - strand, within fabG at 362.001 kb on - strand, within fabG at 362.020 kb on - strand, within fabG at 362.191 kb on - strand, within fabG at 362.260 kb on + strand, within fabG at 362.302 kb on + strand, within fabG at 362.303 kb on - strand, within fabG at 362.310 kb on - strand, within fabG at 362.420 kb on + strand at 362.501 kb on + strand at 362.529 kb on + strand at 362.529 kb on + strand at 362.529 kb on + strand at 362.537 kb on - strand at 362.564 kb on + strand at 362.564 kb on + strand at 362.564 kb on + strand at 362.572 kb on - strand at 362.712 kb on - strand, within Shewana3_0328 at 362.764 kb on - strand, within Shewana3_0328 at 362.764 kb on - strand, within Shewana3_0328 at 362.773 kb on + strand, within Shewana3_0328 at 362.871 kb on - strand, within Shewana3_0328 at 363.171 kb on + strand at 363.298 kb on + strand, within Shewana3_0329 at 363.457 kb on - strand, within Shewana3_0329 at 363.503 kb on + strand, within Shewana3_0329 at 363.567 kb on - strand, within Shewana3_0329 at 363.582 kb on - strand, within Shewana3_0329 at 363.700 kb on + strand, within Shewana3_0329 at 363.708 kb on - strand, within Shewana3_0329 at 363.828 kb on + strand, within Shewana3_0329 at 363.981 kb on + strand, within Shewana3_0329 at 364.015 kb on + strand, within Shewana3_0329 at 364.023 kb on + strand, within Shewana3_0329 at 364.023 kb on + strand, within Shewana3_0329 at 364.056 kb on - strand, within Shewana3_0329 at 364.056 kb on - strand, within Shewana3_0329
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 361,612 + -1.0 361,612 + -2.2 361,612 + +0.2 361,612 + -0.0 361,620 - -0.4 361,620 - -0.0 361,620 - +0.0 361,620 - +0.7 361,654 - -0.5 361,691 + -1.1 361,699 - -0.5 361,838 - fabG Shewana3_0327 0.17 -0.4 361,845 + fabG Shewana3_0327 0.18 +0.5 361,845 + fabG Shewana3_0327 0.18 -0.2 361,853 - fabG Shewana3_0327 0.19 -0.1 361,930 + fabG Shewana3_0327 0.30 +0.5 361,930 + fabG Shewana3_0327 0.30 +0.6 361,930 + fabG Shewana3_0327 0.30 +0.8 361,930 + fabG Shewana3_0327 0.30 +0.5 361,938 - fabG Shewana3_0327 0.31 -1.0 361,938 - fabG Shewana3_0327 0.31 +0.0 361,938 - fabG Shewana3_0327 0.31 +0.4 361,938 - fabG Shewana3_0327 0.31 +0.0 361,957 + fabG Shewana3_0327 0.33 +0.4 361,968 + fabG Shewana3_0327 0.35 +0.5 361,993 + fabG Shewana3_0327 0.38 -0.3 362,001 - fabG Shewana3_0327 0.39 -0.3 362,001 - fabG Shewana3_0327 0.39 +0.5 362,020 - fabG Shewana3_0327 0.42 -0.1 362,191 - fabG Shewana3_0327 0.66 +0.8 362,260 + fabG Shewana3_0327 0.75 -1.0 362,302 + fabG Shewana3_0327 0.81 -0.6 362,303 - fabG Shewana3_0327 0.81 -0.3 362,310 - fabG Shewana3_0327 0.82 +1.2 362,420 + -0.5 362,501 + +0.0 362,529 + +0.2 362,529 + +0.4 362,529 + +0.7 362,537 - +0.8 362,564 + +0.7 362,564 + +0.5 362,564 + +0.5 362,572 - +0.0 362,712 - Shewana3_0328 0.27 -0.0 362,764 - Shewana3_0328 0.37 +0.4 362,764 - Shewana3_0328 0.37 +0.7 362,773 + Shewana3_0328 0.38 +0.9 362,871 - Shewana3_0328 0.56 +0.3 363,171 + +1.0 363,298 + Shewana3_0329 0.15 -0.1 363,457 - Shewana3_0329 0.28 -0.0 363,503 + Shewana3_0329 0.32 +0.5 363,567 - Shewana3_0329 0.37 +0.7 363,582 - Shewana3_0329 0.39 +0.4 363,700 + Shewana3_0329 0.48 -0.0 363,708 - Shewana3_0329 0.49 +0.0 363,828 + Shewana3_0329 0.59 -0.8 363,981 + Shewana3_0329 0.71 -0.4 364,015 + Shewana3_0329 0.74 +0.7 364,023 + Shewana3_0329 0.75 +0.2 364,023 + Shewana3_0329 0.75 -0.0 364,056 - Shewana3_0329 0.78 -0.3 364,056 - Shewana3_0329 0.78 +0.2
Or see this region's nucleotide sequence