Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0184 and Shewana3_R0012 are separated by 234 nucleotides Shewana3_R0012 and Shewana3_R0013 are separated by 7 nucleotides Shewana3_R0013 and Shewana3_R0014 are separated by 35 nucleotides Shewana3_R0014 and Shewana3_R0015 are separated by 9 nucleotides Shewana3_R0015 and Shewana3_0185 are separated by 115 nucleotides Shewana3_0185 and secE are separated by 279 nucleotides secE and Shewana3_0187 are separated by 9 nucleotides
Shewana3_0184: Shewana3_0184 - pantothenate kinase (RefSeq), at 223,327 to 224,277
_0184
Shewana3_R0012: Shewana3_R0012 - tRNA-Thr (RefSeq), at 224,512 to 224,587
_R0012
Shewana3_R0013: Shewana3_R0013 - tRNA-Tyr (RefSeq), at 224,595 to 224,679
_R0013
Shewana3_R0014: Shewana3_R0014 - tRNA-Gly (RefSeq), at 224,715 to 224,788
_R0014
Shewana3_R0015: Shewana3_R0015 - tRNA-Thr (RefSeq), at 224,798 to 224,873
_R0015
Shewana3_0185: Shewana3_0185 - elongation factor Tu (RefSeq), at 224,989 to 226,173
_0185
Shewana3_0186: secE - preprotein translocase subunit SecE (RefSeq), at 226,453 to 226,824
secE
Shewana3_0187: Shewana3_0187 - transcription antitermination protein nusG (RefSeq), at 226,834 to 227,385
_0187
Position (kb)
224
225
226
227 Strain fitness (log2 ratio)
-1
0
1 at 224.371 kb on - strand at 224.826 kb on + strand, within Shewana3_R0015
Per-strain Table
Or see this region's nucleotide sequence