Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0124 and Shewana3_0125 are separated by 65 nucleotides Shewana3_0125 and Shewana3_0126 are separated by 101 nucleotides Shewana3_0126 and Shewana3_0127 are separated by 60 nucleotides
Shewana3_0124: Shewana3_0124 - peptidase M6, immune inhibitor A (RefSeq), at 139,551 to 142,121
_0124
Shewana3_0125: Shewana3_0125 - chorismate lyase (RefSeq), at 142,187 to 142,750
_0125
Shewana3_0126: Shewana3_0126 - flagellar basal body-associated protein FliL-like protein (RefSeq), at 142,852 to 143,262
_0126
Shewana3_0127: Shewana3_0127 - putative SAM-dependent methyltransferase (RefSeq), at 143,323 to 144,417
_0127
Position (kb)
142
143
144 Strain fitness (log2 ratio)
-1
0
1
2 at 141.858 kb on + strand, within Shewana3_0124 at 141.938 kb on + strand at 141.938 kb on + strand at 141.978 kb on - strand at 141.994 kb on + strand at 141.994 kb on + strand at 142.002 kb on - strand at 142.002 kb on - strand at 142.044 kb on - strand at 142.060 kb on + strand at 142.172 kb on + strand at 142.180 kb on - strand at 142.187 kb on - strand at 142.393 kb on + strand, within Shewana3_0125 at 142.508 kb on + strand, within Shewana3_0125 at 142.508 kb on + strand, within Shewana3_0125 at 142.516 kb on - strand, within Shewana3_0125 at 142.576 kb on - strand, within Shewana3_0125 at 142.663 kb on + strand, within Shewana3_0125 at 142.730 kb on + strand at 142.737 kb on - strand at 142.837 kb on + strand at 142.889 kb on + strand at 142.949 kb on - strand, within Shewana3_0126 at 143.019 kb on + strand, within Shewana3_0126 at 143.217 kb on + strand, within Shewana3_0126 at 143.456 kb on - strand, within Shewana3_0127 at 143.475 kb on - strand, within Shewana3_0127 at 143.485 kb on - strand, within Shewana3_0127 at 143.507 kb on - strand, within Shewana3_0127 at 143.818 kb on + strand, within Shewana3_0127 at 143.862 kb on + strand, within Shewana3_0127 at 143.887 kb on + strand, within Shewana3_0127 at 143.977 kb on + strand, within Shewana3_0127 at 144.017 kb on - strand, within Shewana3_0127 at 144.107 kb on - strand, within Shewana3_0127 at 144.107 kb on - strand, within Shewana3_0127 at 144.126 kb on - strand, within Shewana3_0127 at 144.200 kb on + strand, within Shewana3_0127
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 141,858 + Shewana3_0124 0.90 +0.7 141,938 + +0.4 141,938 + +0.1 141,978 - -0.0 141,994 + +0.9 141,994 + +0.6 142,002 - +0.5 142,002 - -0.4 142,044 - +0.9 142,060 + +0.1 142,172 + -0.6 142,180 - +0.3 142,187 - -0.2 142,393 + Shewana3_0125 0.37 -0.6 142,508 + Shewana3_0125 0.57 -0.2 142,508 + Shewana3_0125 0.57 -0.2 142,516 - Shewana3_0125 0.58 +0.1 142,576 - Shewana3_0125 0.69 -0.9 142,663 + Shewana3_0125 0.84 -0.3 142,730 + -0.3 142,737 - -0.5 142,837 + -0.5 142,889 + +1.3 142,949 - Shewana3_0126 0.24 +0.2 143,019 + Shewana3_0126 0.41 +1.4 143,217 + Shewana3_0126 0.89 +2.6 143,456 - Shewana3_0127 0.12 -0.4 143,475 - Shewana3_0127 0.14 +0.5 143,485 - Shewana3_0127 0.15 +0.4 143,507 - Shewana3_0127 0.17 -0.6 143,818 + Shewana3_0127 0.45 -0.1 143,862 + Shewana3_0127 0.49 -0.3 143,887 + Shewana3_0127 0.52 -0.1 143,977 + Shewana3_0127 0.60 -0.4 144,017 - Shewana3_0127 0.63 -0.1 144,107 - Shewana3_0127 0.72 -0.3 144,107 - Shewana3_0127 0.72 -0.6 144,126 - Shewana3_0127 0.73 -0.0 144,200 + Shewana3_0127 0.80 +0.4
Or see this region's nucleotide sequence