Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_4326 and Shewana3_4327 are separated by 236 nucleotides Shewana3_4327 and Shewana3_4328 are separated by 137 nucleotides
Shewana3_4326: Shewana3_4326 - methionine sulfoxide reductase B (RefSeq), at 215,589 to 216,035
_4326
Shewana3_4327: Shewana3_4327 - hypothetical protein (RefSeq), at 216,272 to 216,787
_4327
Shewana3_4328: Shewana3_4328 - alkylhydroperoxidase (RefSeq), at 216,925 to 217,479
_4328
Position (kb) 216
217
218 Strain fitness (log2 ratio) -2
-1
0
1
2 at 215.964 kb on - strand, within Shewana3_4326 at 215.974 kb on + strand, within Shewana3_4326 at 215.974 kb on + strand, within Shewana3_4326 at 215.994 kb on - strand at 216.058 kb on + strand at 216.148 kb on + strand at 216.156 kb on - strand at 216.156 kb on - strand at 216.218 kb on + strand at 216.576 kb on + strand, within Shewana3_4327 at 216.576 kb on + strand, within Shewana3_4327 at 216.702 kb on + strand, within Shewana3_4327 at 216.823 kb on + strand at 216.823 kb on + strand at 216.823 kb on + strand at 216.888 kb on - strand at 216.965 kb on + strand at 216.978 kb on - strand at 217.070 kb on + strand, within Shewana3_4328 at 217.078 kb on - strand, within Shewana3_4328 at 217.182 kb on + strand, within Shewana3_4328 at 217.267 kb on + strand, within Shewana3_4328 at 217.306 kb on + strand, within Shewana3_4328 at 217.335 kb on - strand, within Shewana3_4328 at 217.335 kb on - strand, within Shewana3_4328 at 217.355 kb on - strand, within Shewana3_4328 at 217.407 kb on + strand, within Shewana3_4328 at 217.423 kb on + strand, within Shewana3_4328 at 217.428 kb on + strand at 217.455 kb on + strand at 217.625 kb on - strand at 217.650 kb on + strand at 217.669 kb on - strand at 217.774 kb on + strand at 217.796 kb on + strand at 217.831 kb on + strand at 217.831 kb on + strand at 217.834 kb on + strand at 217.963 kb on + strand at 218.039 kb on + strand at 218.047 kb on - strand at 218.123 kb on + strand at 218.123 kb on + strand at 218.131 kb on - strand at 218.131 kb on - strand at 218.131 kb on - strand at 218.162 kb on - strand at 218.192 kb on - strand at 218.201 kb on + strand at 218.201 kb on + strand at 218.201 kb on + strand at 218.209 kb on - strand at 218.307 kb on - strand at 218.419 kb on - strand at 218.430 kb on + strand at 218.461 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.064 mg/ml remove 215,964 - Shewana3_4326 0.84 +0.7 215,974 + Shewana3_4326 0.86 -1.0 215,974 + Shewana3_4326 0.86 -1.3 215,994 - -0.9 216,058 + -0.4 216,148 + +0.5 216,156 - +1.0 216,156 - +0.0 216,218 + -0.4 216,576 + Shewana3_4327 0.59 -2.6 216,576 + Shewana3_4327 0.59 +0.1 216,702 + Shewana3_4327 0.83 +0.0 216,823 + +0.1 216,823 + +0.3 216,823 + +0.1 216,888 - +0.5 216,965 + +0.3 216,978 - +0.5 217,070 + Shewana3_4328 0.26 -0.1 217,078 - Shewana3_4328 0.28 -0.3 217,182 + Shewana3_4328 0.46 +0.1 217,267 + Shewana3_4328 0.62 -0.7 217,306 + Shewana3_4328 0.69 -0.2 217,335 - Shewana3_4328 0.74 -1.3 217,335 - Shewana3_4328 0.74 -0.0 217,355 - Shewana3_4328 0.77 +1.0 217,407 + Shewana3_4328 0.87 -1.0 217,423 + Shewana3_4328 0.90 -0.1 217,428 + -2.7 217,455 + -0.1 217,625 - +0.1 217,650 + +2.3 217,669 - +1.1 217,774 + -1.1 217,796 + -0.4 217,831 + -1.5 217,831 + +0.6 217,834 + -0.1 217,963 + +0.8 218,039 + -1.8 218,047 - -1.0 218,123 + -0.6 218,123 + +0.3 218,131 - -0.4 218,131 - -0.5 218,131 - -0.5 218,162 - -0.5 218,192 - +0.8 218,201 + -0.7 218,201 + -0.3 218,201 + -1.5 218,209 - -0.7 218,307 - -2.3 218,419 - -1.2 218,430 + +0.1 218,461 - -1.1
Or see this region's nucleotide sequence