Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4156
Experiment: Thallium(I) acetate 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
16,453 | - | +0.2 | |||
16,569 | + | +0.2 | |||
16,602 | - | Shewana3_4155 | 0.10 | -0.7 | |
16,921 | + | Shewana3_4155 | 0.44 | -0.6 | |
16,951 | + | Shewana3_4155 | 0.47 | -0.4 | |
17,106 | + | Shewana3_4155 | 0.64 | -0.4 | |
17,120 | - | Shewana3_4155 | 0.65 | +0.0 | |
17,294 | + | Shewana3_4155 | 0.84 | -1.2 | |
17,302 | - | Shewana3_4155 | 0.85 | +0.5 | |
17,387 | + | +0.9 | |||
17,493 | - | +0.3 | |||
17,513 | - | +0.4 | |||
17,534 | + | +0.4 | |||
17,772 | - | Shewana3_4156 | 0.24 | -0.8 | |
17,941 | - | Shewana3_4156 | 0.37 | -0.8 | |
18,104 | + | Shewana3_4156 | 0.49 | -0.1 | |
18,109 | + | Shewana3_4156 | 0.50 | +1.4 | |
18,321 | + | Shewana3_4156 | 0.65 | +0.9 | |
18,408 | - | Shewana3_4156 | 0.72 | +0.8 | |
18,423 | + | Shewana3_4156 | 0.73 | -0.3 | |
18,560 | + | Shewana3_4156 | 0.83 | +0.8 | |
18,644 | - | Shewana3_4156 | 0.89 | +0.7 | |
19,050 | - | -1.6 | |||
19,276 | - | -1.1 | |||
19,422 | - | +1.1 | |||
19,422 | - | +0.1 | |||
19,427 | - | -1.2 | |||
19,497 | + | -0.8 | |||
19,695 | + | Shewana3_4157 | 0.31 | -1.5 | |
19,695 | + | Shewana3_4157 | 0.31 | -0.6 | |
19,708 | - | Shewana3_4157 | 0.32 | +0.9 |
Or see this region's nucleotide sequence