Strain Fitness in Shewanella loihica PV-4 around Shew_3064

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,638,199	+				+0.0
3,638,864	-		Shew_3063	0.83	+0.8
3,639,113	-				+1.0
3,639,136	+				+0.2
3,639,267	-	gcvT	Shew_3064	0.13	+0.9
3,639,306	-	gcvT	Shew_3064	0.17	+0.8
3,639,359	-	gcvT	Shew_3064	0.21	+0.6
3,639,437	+	gcvT	Shew_3064	0.28	+0.0
3,639,518	+	gcvT	Shew_3064	0.36	-0.5
3,639,526	-	gcvT	Shew_3064	0.37	+1.0
3,639,576	-	gcvT	Shew_3064	0.41	+1.0
3,639,683	+	gcvT	Shew_3064	0.51	+0.5
3,639,859	-	gcvT	Shew_3064	0.67	+0.8
3,640,398	-				+1.1
3,640,522	-				+0.5
3,640,522	-				+0.1
3,640,730	+				-0.7
3,640,730	+				-0.3
3,641,024	-		Shew_3065	0.27	-0.8
3,641,099	+		Shew_3065	0.33	-1.1
3,641,134	-		Shew_3065	0.36	-2.0