Strain Fitness in Shewanella loihica PV-4 around Shew_0958

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,100,741	+		Shew_0956	0.73	+0.7
1,100,741	+		Shew_0956	0.73	+0.4
1,100,746	+		Shew_0956	0.74	+0.5
1,100,749	-		Shew_0956	0.75	-0.3
1,100,962	+				+0.9
1,100,996	-				+0.1
1,101,053	-		Shew_0957	0.18	-0.4
1,101,445	-				+0.5
1,101,463	-				-0.4
1,101,463	-				-0.3
1,101,463	-				-0.1
1,101,515	-				-0.5
1,101,562	+				-0.2
1,101,670	+				+0.1
1,101,765	-		Shew_0958	0.16	-1.2
1,101,986	-		Shew_0958	0.31	+0.5
1,102,233	+		Shew_0958	0.48	+0.2
1,102,233	+		Shew_0958	0.48	+0.0
1,102,622	-		Shew_0958	0.75	-0.1
1,102,629	+		Shew_0958	0.75	-1.2
1,102,747	+		Shew_0958	0.83	-0.8
1,102,860	+				+0.2
1,103,251	+		Shew_0959	0.24	+0.0
1,103,259	-		Shew_0959	0.25	-0.6
1,103,259	-		Shew_0959	0.25	+0.2
1,103,530	+		Shew_0959	0.82	+0.2