Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5732 and Pf6N2E2_5733 are separated by 289 nucleotides Pf6N2E2_5733 and Pf6N2E2_5734 are separated by 164 nucleotides Pf6N2E2_5734 and Pf6N2E2_5735 are separated by 181 nucleotides
Pf6N2E2_5732 - Chromosomal replication initiator protein DnaA, at 6,549,412 to 6,550,116
_5732
Pf6N2E2_5733 - NLP/P60 family protein, at 6,550,406 to 6,550,957
_5733
Pf6N2E2_5734 - NLP/P60 family protein, at 6,551,122 to 6,551,655
_5734
Pf6N2E2_5735 - L-sorbosone dehydrogenase, at 6,551,837 to 6,553,147
_5735
Position (kb)
6550
6551 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 6550.114 kb on + strand at 6550.115 kb on - strand at 6550.185 kb on - strand at 6550.220 kb on + strand at 6550.220 kb on + strand at 6550.226 kb on + strand at 6550.226 kb on + strand at 6550.226 kb on + strand at 6550.226 kb on + strand at 6550.227 kb on - strand at 6550.227 kb on - strand at 6550.282 kb on + strand at 6550.282 kb on + strand at 6550.282 kb on + strand at 6550.282 kb on + strand at 6550.283 kb on - strand at 6550.292 kb on - strand at 6550.306 kb on + strand at 6550.306 kb on + strand at 6550.306 kb on + strand at 6550.307 kb on - strand at 6550.309 kb on + strand at 6550.335 kb on + strand at 6550.336 kb on - strand at 6550.529 kb on + strand, within Pf6N2E2_5733 at 6550.529 kb on + strand, within Pf6N2E2_5733 at 6550.529 kb on + strand, within Pf6N2E2_5733 at 6550.805 kb on + strand, within Pf6N2E2_5733 at 6550.805 kb on + strand, within Pf6N2E2_5733 at 6550.805 kb on + strand, within Pf6N2E2_5733 at 6550.805 kb on + strand, within Pf6N2E2_5733 at 6550.883 kb on + strand, within Pf6N2E2_5733 at 6550.883 kb on + strand, within Pf6N2E2_5733 at 6550.955 kb on + strand at 6550.955 kb on + strand at 6550.956 kb on - strand at 6551.121 kb on + strand at 6551.121 kb on + strand at 6551.121 kb on + strand at 6551.121 kb on + strand at 6551.121 kb on + strand at 6551.121 kb on + strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.317 kb on - strand, within Pf6N2E2_5734 at 6551.317 kb on - strand, within Pf6N2E2_5734 at 6551.317 kb on - strand, within Pf6N2E2_5734 at 6551.317 kb on - strand, within Pf6N2E2_5734 at 6551.356 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.602 kb on + strand at 6551.602 kb on + strand at 6551.602 kb on + strand at 6551.603 kb on - strand at 6551.676 kb on + strand at 6551.676 kb on + strand at 6551.676 kb on + strand at 6551.838 kb on + strand at 6551.838 kb on + strand at 6551.838 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 6,550,114 + +1.0 6,550,115 - +0.4 6,550,185 - +0.9 6,550,220 + +0.5 6,550,220 + +0.4 6,550,226 + -2.3 6,550,226 + -0.2 6,550,226 + +0.8 6,550,226 + +0.0 6,550,227 - -2.1 6,550,227 - +0.6 6,550,282 + +0.0 6,550,282 + -0.4 6,550,282 + -0.9 6,550,282 + -0.5 6,550,283 - -1.1 6,550,292 - -0.1 6,550,306 + -2.5 6,550,306 + -0.1 6,550,306 + -2.1 6,550,307 - -0.9 6,550,309 + -1.1 6,550,335 + -2.2 6,550,336 - -3.1 6,550,529 + Pf6N2E2_5733 0.22 -0.4 6,550,529 + Pf6N2E2_5733 0.22 -0.9 6,550,529 + Pf6N2E2_5733 0.22 -0.9 6,550,805 + Pf6N2E2_5733 0.72 +0.2 6,550,805 + Pf6N2E2_5733 0.72 -0.6 6,550,805 + Pf6N2E2_5733 0.72 -0.2 6,550,805 + Pf6N2E2_5733 0.72 -2.0 6,550,883 + Pf6N2E2_5733 0.86 -1.6 6,550,883 + Pf6N2E2_5733 0.86 -1.4 6,550,955 + +0.0 6,550,955 + +0.8 6,550,956 - -0.9 6,551,121 + -0.1 6,551,121 + +1.2 6,551,121 + +1.0 6,551,121 + +1.0 6,551,121 + +0.9 6,551,121 + +0.5 6,551,122 - +0.0 6,551,122 - +0.6 6,551,122 - -0.1 6,551,122 - +0.6 6,551,122 - -0.1 6,551,122 - +0.1 6,551,122 - -0.8 6,551,122 - -0.7 6,551,122 - +0.2 6,551,122 - +0.5 6,551,122 - -0.7 6,551,122 - -0.4 6,551,122 - +0.6 6,551,317 - Pf6N2E2_5734 0.37 -0.5 6,551,317 - Pf6N2E2_5734 0.37 -0.4 6,551,317 - Pf6N2E2_5734 0.37 +0.3 6,551,317 - Pf6N2E2_5734 0.37 -1.2 6,551,356 + Pf6N2E2_5734 0.44 -0.2 6,551,512 + Pf6N2E2_5734 0.73 -0.5 6,551,512 + Pf6N2E2_5734 0.73 -0.5 6,551,512 + Pf6N2E2_5734 0.73 +0.8 6,551,512 + Pf6N2E2_5734 0.73 +0.2 6,551,512 + Pf6N2E2_5734 0.73 +0.9 6,551,512 + Pf6N2E2_5734 0.73 +1.4 6,551,512 + Pf6N2E2_5734 0.73 -0.3 6,551,512 + Pf6N2E2_5734 0.73 +0.6 6,551,512 + Pf6N2E2_5734 0.73 +0.3 6,551,513 - Pf6N2E2_5734 0.73 +0.9 6,551,513 - Pf6N2E2_5734 0.73 -0.6 6,551,513 - Pf6N2E2_5734 0.73 +0.4 6,551,513 - Pf6N2E2_5734 0.73 -0.7 6,551,513 - Pf6N2E2_5734 0.73 +0.4 6,551,513 - Pf6N2E2_5734 0.73 -0.2 6,551,513 - Pf6N2E2_5734 0.73 +0.3 6,551,513 - Pf6N2E2_5734 0.73 +0.6 6,551,513 - Pf6N2E2_5734 0.73 -0.6 6,551,513 - Pf6N2E2_5734 0.73 -0.1 6,551,513 - Pf6N2E2_5734 0.73 +0.6 6,551,513 - Pf6N2E2_5734 0.73 -0.5 6,551,602 + +0.4 6,551,602 + -0.5 6,551,602 + +1.2 6,551,603 - +0.8 6,551,676 + +0.2 6,551,676 + +0.2 6,551,676 + -0.1 6,551,838 + +1.2 6,551,838 + +1.4 6,551,838 + -0.7
Or see this region's nucleotide sequence