Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5427 and Pf6N2E2_5428 are separated by 191 nucleotides Pf6N2E2_5428 and Pf6N2E2_5429 are separated by 49 nucleotides Pf6N2E2_5429 and Pf6N2E2_5430 are separated by 204 nucleotides
Pf6N2E2_5427 - GTP-binding protein Era, at 6,232,382 to 6,233,284
_5427
Pf6N2E2_5428 - DNA recombination and repair protein RecO, at 6,233,476 to 6,234,165
_5428
Pf6N2E2_5429 - Pyridoxine 5'-phosphate synthase (EC 2.6.99.2), at 6,234,215 to 6,234,958
_5429
Pf6N2E2_5430 - Transglycosylase, Slt family, at 6,235,163 to 6,236,500
_5430
Position (kb)
6233
6234
6235 Strain fitness (log2 ratio)
-2
-1
0
1 at 6233.282 kb on + strand at 6233.282 kb on + strand at 6233.445 kb on + strand at 6233.462 kb on + strand at 6233.462 kb on + strand at 6233.744 kb on + strand, within Pf6N2E2_5428 at 6233.744 kb on + strand, within Pf6N2E2_5428 at 6233.744 kb on + strand, within Pf6N2E2_5428 at 6233.744 kb on + strand, within Pf6N2E2_5428 at 6233.744 kb on + strand, within Pf6N2E2_5428 at 6233.745 kb on - strand, within Pf6N2E2_5428 at 6233.745 kb on - strand, within Pf6N2E2_5428 at 6233.746 kb on + strand, within Pf6N2E2_5428 at 6233.747 kb on - strand, within Pf6N2E2_5428 at 6233.747 kb on - strand, within Pf6N2E2_5428 at 6233.747 kb on - strand, within Pf6N2E2_5428 at 6233.812 kb on + strand, within Pf6N2E2_5428 at 6233.813 kb on - strand, within Pf6N2E2_5428 at 6233.903 kb on - strand, within Pf6N2E2_5428 at 6233.966 kb on + strand, within Pf6N2E2_5428 at 6233.995 kb on + strand, within Pf6N2E2_5428 at 6233.996 kb on - strand, within Pf6N2E2_5428 at 6234.174 kb on + strand at 6234.174 kb on + strand at 6234.175 kb on - strand at 6234.190 kb on + strand at 6234.190 kb on + strand at 6234.190 kb on + strand at 6234.985 kb on + strand at 6234.985 kb on + strand at 6234.985 kb on + strand at 6234.986 kb on - strand at 6235.082 kb on + strand at 6235.082 kb on + strand at 6235.083 kb on - strand at 6235.083 kb on - strand at 6235.156 kb on + strand at 6235.156 kb on + strand at 6235.156 kb on + strand at 6235.156 kb on + strand at 6235.157 kb on - strand at 6235.157 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 6,233,282 + +0.0 6,233,282 + +0.0 6,233,445 + -0.2 6,233,462 + -0.5 6,233,462 + -0.2 6,233,744 + Pf6N2E2_5428 0.39 -0.5 6,233,744 + Pf6N2E2_5428 0.39 -1.2 6,233,744 + Pf6N2E2_5428 0.39 -0.7 6,233,744 + Pf6N2E2_5428 0.39 -0.4 6,233,744 + Pf6N2E2_5428 0.39 -2.7 6,233,745 - Pf6N2E2_5428 0.39 +0.7 6,233,745 - Pf6N2E2_5428 0.39 -2.0 6,233,746 + Pf6N2E2_5428 0.39 -0.6 6,233,747 - Pf6N2E2_5428 0.39 -0.5 6,233,747 - Pf6N2E2_5428 0.39 -0.4 6,233,747 - Pf6N2E2_5428 0.39 -0.7 6,233,812 + Pf6N2E2_5428 0.49 -0.1 6,233,813 - Pf6N2E2_5428 0.49 +0.1 6,233,903 - Pf6N2E2_5428 0.62 -0.9 6,233,966 + Pf6N2E2_5428 0.71 -0.2 6,233,995 + Pf6N2E2_5428 0.75 -0.4 6,233,996 - Pf6N2E2_5428 0.75 -0.5 6,234,174 + +0.3 6,234,174 + +0.1 6,234,175 - -0.7 6,234,190 + +0.2 6,234,190 + +0.1 6,234,190 + +0.1 6,234,985 + -0.5 6,234,985 + -0.5 6,234,985 + +0.3 6,234,986 - +1.1 6,235,082 + +0.3 6,235,082 + -0.3 6,235,083 - -0.6 6,235,083 - +0.4 6,235,156 + -0.7 6,235,156 + +0.8 6,235,156 + -0.2 6,235,156 + -0.4 6,235,157 - -0.8 6,235,157 - +0.1
Or see this region's nucleotide sequence