Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5315 and Pf6N2E2_5316 are separated by 309 nucleotides Pf6N2E2_5316 and Pf6N2E2_5317 are separated by 807 nucleotides
Pf6N2E2_5315 - Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17), at 6,109,599 to 6,110,780
_5315
Pf6N2E2_5316 - Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation, at 6,111,090 to 6,111,599
_5316
Pf6N2E2_5317 - Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-), at 6,112,407 to 6,113,321
_5317
Position (kb)
6111
6112 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6110.118 kb on + strand, within Pf6N2E2_5315 at 6110.169 kb on + strand, within Pf6N2E2_5315 at 6110.169 kb on + strand, within Pf6N2E2_5315 at 6110.169 kb on + strand, within Pf6N2E2_5315 at 6110.169 kb on + strand, within Pf6N2E2_5315 at 6110.170 kb on - strand, within Pf6N2E2_5315 at 6110.170 kb on - strand, within Pf6N2E2_5315 at 6110.170 kb on - strand, within Pf6N2E2_5315 at 6110.206 kb on + strand, within Pf6N2E2_5315 at 6110.206 kb on + strand, within Pf6N2E2_5315 at 6110.217 kb on + strand, within Pf6N2E2_5315 at 6110.217 kb on + strand, within Pf6N2E2_5315 at 6110.217 kb on + strand, within Pf6N2E2_5315 at 6110.218 kb on - strand, within Pf6N2E2_5315 at 6110.218 kb on - strand, within Pf6N2E2_5315 at 6110.218 kb on - strand, within Pf6N2E2_5315 at 6110.255 kb on + strand, within Pf6N2E2_5315 at 6110.255 kb on + strand, within Pf6N2E2_5315 at 6110.255 kb on + strand, within Pf6N2E2_5315 at 6110.255 kb on + strand, within Pf6N2E2_5315 at 6110.256 kb on - strand, within Pf6N2E2_5315 at 6110.256 kb on - strand, within Pf6N2E2_5315 at 6110.358 kb on + strand, within Pf6N2E2_5315 at 6110.358 kb on + strand, within Pf6N2E2_5315 at 6110.556 kb on + strand, within Pf6N2E2_5315 at 6110.556 kb on + strand, within Pf6N2E2_5315 at 6110.556 kb on + strand, within Pf6N2E2_5315 at 6110.557 kb on - strand, within Pf6N2E2_5315 at 6110.562 kb on + strand, within Pf6N2E2_5315 at 6110.664 kb on + strand at 6110.664 kb on + strand at 6110.778 kb on + strand at 6110.778 kb on + strand at 6110.778 kb on + strand at 6110.778 kb on + strand at 6110.934 kb on + strand at 6110.935 kb on - strand at 6110.945 kb on + strand at 6110.945 kb on + strand at 6110.945 kb on + strand at 6110.945 kb on + strand at 6110.945 kb on + strand at 6110.945 kb on + strand at 6110.946 kb on - strand at 6110.946 kb on - strand at 6110.946 kb on - strand at 6110.946 kb on - strand at 6110.946 kb on - strand at 6110.946 kb on - strand at 6110.962 kb on - strand at 6110.962 kb on - strand at 6111.014 kb on + strand at 6111.014 kb on + strand at 6111.015 kb on - strand at 6111.180 kb on + strand, within Pf6N2E2_5316 at 6111.181 kb on - strand, within Pf6N2E2_5316 at 6111.366 kb on + strand, within Pf6N2E2_5316 at 6111.367 kb on - strand, within Pf6N2E2_5316 at 6111.367 kb on - strand, within Pf6N2E2_5316 at 6111.758 kb on + strand at 6111.758 kb on + strand at 6111.914 kb on + strand at 6111.928 kb on + strand at 6111.928 kb on + strand at 6111.928 kb on + strand at 6111.928 kb on + strand at 6111.928 kb on + strand at 6111.928 kb on + strand at 6111.928 kb on + strand at 6111.928 kb on + strand at 6111.928 kb on + strand at 6111.929 kb on - strand at 6111.929 kb on - strand at 6111.929 kb on - strand at 6111.929 kb on - strand at 6111.929 kb on - strand at 6111.929 kb on - strand at 6112.068 kb on + strand at 6112.068 kb on + strand at 6112.068 kb on + strand at 6112.201 kb on + strand at 6112.201 kb on + strand at 6112.201 kb on + strand at 6112.202 kb on - strand at 6112.202 kb on - strand at 6112.221 kb on - strand at 6112.221 kb on - strand at 6112.221 kb on - strand at 6112.281 kb on + strand at 6112.282 kb on - strand at 6112.282 kb on - strand at 6112.282 kb on - strand at 6112.361 kb on + strand at 6112.362 kb on - strand at 6112.379 kb on + strand at 6112.400 kb on - strand at 6112.402 kb on + strand at 6112.402 kb on + strand at 6112.402 kb on + strand at 6112.403 kb on - strand at 6112.403 kb on - strand at 6112.403 kb on - strand at 6112.403 kb on - strand at 6112.575 kb on + strand, within Pf6N2E2_5317 at 6112.589 kb on + strand, within Pf6N2E2_5317 at 6112.590 kb on - strand, within Pf6N2E2_5317 at 6112.590 kb on - strand, within Pf6N2E2_5317
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 6,110,118 + Pf6N2E2_5315 0.44 -0.3 6,110,169 + Pf6N2E2_5315 0.48 -0.2 6,110,169 + Pf6N2E2_5315 0.48 +0.1 6,110,169 + Pf6N2E2_5315 0.48 +0.7 6,110,169 + Pf6N2E2_5315 0.48 +0.4 6,110,170 - Pf6N2E2_5315 0.48 -0.4 6,110,170 - Pf6N2E2_5315 0.48 -2.7 6,110,170 - Pf6N2E2_5315 0.48 +1.4 6,110,206 + Pf6N2E2_5315 0.51 +0.3 6,110,206 + Pf6N2E2_5315 0.51 +1.0 6,110,217 + Pf6N2E2_5315 0.52 +0.4 6,110,217 + Pf6N2E2_5315 0.52 +0.6 6,110,217 + Pf6N2E2_5315 0.52 +0.1 6,110,218 - Pf6N2E2_5315 0.52 +1.0 6,110,218 - Pf6N2E2_5315 0.52 +0.5 6,110,218 - Pf6N2E2_5315 0.52 -0.6 6,110,255 + Pf6N2E2_5315 0.55 -0.2 6,110,255 + Pf6N2E2_5315 0.55 -0.1 6,110,255 + Pf6N2E2_5315 0.55 -0.9 6,110,255 + Pf6N2E2_5315 0.55 -2.2 6,110,256 - Pf6N2E2_5315 0.56 -0.9 6,110,256 - Pf6N2E2_5315 0.56 -1.2 6,110,358 + Pf6N2E2_5315 0.64 -1.0 6,110,358 + Pf6N2E2_5315 0.64 +1.3 6,110,556 + Pf6N2E2_5315 0.81 +0.0 6,110,556 + Pf6N2E2_5315 0.81 -0.0 6,110,556 + Pf6N2E2_5315 0.81 +0.6 6,110,557 - Pf6N2E2_5315 0.81 -0.6 6,110,562 + Pf6N2E2_5315 0.81 +0.2 6,110,664 + +1.1 6,110,664 + -0.2 6,110,778 + +0.9 6,110,778 + -0.2 6,110,778 + +0.8 6,110,778 + -0.5 6,110,934 + +0.4 6,110,935 - +0.4 6,110,945 + +0.4 6,110,945 + +1.7 6,110,945 + +0.6 6,110,945 + -1.1 6,110,945 + +1.3 6,110,945 + +0.1 6,110,946 - +0.7 6,110,946 - +0.3 6,110,946 - +0.3 6,110,946 - +0.9 6,110,946 - +0.7 6,110,946 - +0.0 6,110,962 - -0.3 6,110,962 - -0.6 6,111,014 + +0.5 6,111,014 + +0.0 6,111,015 - -0.9 6,111,180 + Pf6N2E2_5316 0.18 +3.4 6,111,181 - Pf6N2E2_5316 0.18 -1.3 6,111,366 + Pf6N2E2_5316 0.54 -0.5 6,111,367 - Pf6N2E2_5316 0.54 +0.5 6,111,367 - Pf6N2E2_5316 0.54 -0.7 6,111,758 + +1.7 6,111,758 + -0.2 6,111,914 + +0.0 6,111,928 + -0.8 6,111,928 + -0.1 6,111,928 + -0.5 6,111,928 + -0.4 6,111,928 + +0.7 6,111,928 + -0.3 6,111,928 + -0.5 6,111,928 + -0.7 6,111,928 + -0.2 6,111,929 - +0.4 6,111,929 - -0.0 6,111,929 - -0.3 6,111,929 - -0.6 6,111,929 - +0.9 6,111,929 - +1.7 6,112,068 + +0.6 6,112,068 + +0.3 6,112,068 + -0.6 6,112,201 + +1.3 6,112,201 + -0.0 6,112,201 + +0.2 6,112,202 - +0.4 6,112,202 - +0.3 6,112,221 - +0.9 6,112,221 - +0.3 6,112,221 - +0.1 6,112,281 + -0.3 6,112,282 - +0.5 6,112,282 - -0.5 6,112,282 - -0.5 6,112,361 + +1.1 6,112,362 - +0.2 6,112,379 + +2.7 6,112,400 - -0.8 6,112,402 + -0.0 6,112,402 + +0.5 6,112,402 + -0.3 6,112,403 - +0.9 6,112,403 - +0.8 6,112,403 - +1.6 6,112,403 - +0.3 6,112,575 + Pf6N2E2_5317 0.18 +0.5 6,112,589 + Pf6N2E2_5317 0.20 -0.3 6,112,590 - Pf6N2E2_5317 0.20 +0.7 6,112,590 - Pf6N2E2_5317 0.20 -0.9
Or see this region's nucleotide sequence