Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5083 and Pf6N2E2_5084 are separated by 343 nucleotides Pf6N2E2_5084 and Pf6N2E2_5085 are separated by 53 nucleotides
Pf6N2E2_5083 - Serine hydroxymethyltransferase (EC 2.1.2.1), at 5,860,426 to 5,864,202
_5083
Pf6N2E2_5084 - Glutathione-regulated potassium-efflux system ATP-binding protein, at 5,864,546 to 5,866,210
_5084
Pf6N2E2_5085 - Lanthionine biosynthesis protein LanM, at 5,866,264 to 5,869,347
_5085
Position (kb)
5864
5865
5866
5867 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 5863.576 kb on + strand, within Pf6N2E2_5083 at 5863.577 kb on - strand, within Pf6N2E2_5083 at 5863.789 kb on + strand, within Pf6N2E2_5083 at 5863.789 kb on + strand, within Pf6N2E2_5083 at 5863.789 kb on + strand, within Pf6N2E2_5083 at 5863.789 kb on + strand, within Pf6N2E2_5083 at 5863.789 kb on + strand, within Pf6N2E2_5083 at 5863.789 kb on + strand, within Pf6N2E2_5083 at 5863.789 kb on + strand, within Pf6N2E2_5083 at 5863.789 kb on + strand, within Pf6N2E2_5083 at 5863.789 kb on + strand, within Pf6N2E2_5083 at 5863.789 kb on + strand, within Pf6N2E2_5083 at 5863.790 kb on - strand, within Pf6N2E2_5083 at 5863.790 kb on - strand, within Pf6N2E2_5083 at 5863.790 kb on - strand, within Pf6N2E2_5083 at 5863.790 kb on - strand, within Pf6N2E2_5083 at 5863.790 kb on - strand, within Pf6N2E2_5083 at 5863.790 kb on - strand, within Pf6N2E2_5083 at 5863.790 kb on - strand, within Pf6N2E2_5083 at 5863.790 kb on - strand, within Pf6N2E2_5083 at 5863.868 kb on + strand at 5863.869 kb on - strand at 5863.869 kb on - strand at 5864.090 kb on + strand at 5864.090 kb on + strand at 5864.090 kb on + strand at 5864.090 kb on + strand at 5864.090 kb on + strand at 5864.090 kb on + strand at 5864.091 kb on - strand at 5864.091 kb on - strand at 5864.102 kb on + strand at 5864.102 kb on + strand at 5864.102 kb on + strand at 5864.102 kb on + strand at 5864.102 kb on + strand at 5864.102 kb on + strand at 5864.103 kb on - strand at 5864.103 kb on - strand at 5864.103 kb on - strand at 5864.103 kb on - strand at 5864.103 kb on - strand at 5864.103 kb on - strand at 5864.103 kb on - strand at 5864.103 kb on - strand at 5864.280 kb on - strand at 5864.315 kb on + strand at 5864.315 kb on + strand at 5864.315 kb on + strand at 5864.316 kb on - strand at 5864.316 kb on - strand at 5864.316 kb on - strand at 5864.316 kb on - strand at 5864.316 kb on - strand at 5864.317 kb on + strand at 5864.317 kb on + strand at 5864.317 kb on + strand at 5864.318 kb on - strand at 5864.456 kb on - strand at 5864.536 kb on + strand at 5864.537 kb on - strand at 5864.555 kb on + strand at 5864.555 kb on + strand at 5864.555 kb on + strand at 5864.555 kb on + strand at 5864.555 kb on + strand at 5864.556 kb on - strand at 5864.556 kb on - strand at 5864.556 kb on - strand at 5864.556 kb on - strand at 5864.563 kb on + strand at 5864.564 kb on - strand at 5864.564 kb on - strand at 5864.564 kb on - strand at 5864.564 kb on - strand at 5864.617 kb on + strand at 5864.656 kb on - strand at 5864.868 kb on - strand, within Pf6N2E2_5084 at 5864.877 kb on - strand, within Pf6N2E2_5084 at 5865.203 kb on + strand, within Pf6N2E2_5084 at 5865.203 kb on + strand, within Pf6N2E2_5084 at 5865.203 kb on + strand, within Pf6N2E2_5084 at 5865.204 kb on - strand, within Pf6N2E2_5084 at 5865.263 kb on + strand, within Pf6N2E2_5084 at 5865.275 kb on + strand, within Pf6N2E2_5084 at 5865.275 kb on + strand, within Pf6N2E2_5084 at 5865.275 kb on + strand, within Pf6N2E2_5084 at 5865.479 kb on + strand, within Pf6N2E2_5084 at 5865.479 kb on + strand, within Pf6N2E2_5084 at 5865.480 kb on - strand, within Pf6N2E2_5084 at 5865.480 kb on - strand, within Pf6N2E2_5084 at 5865.480 kb on - strand, within Pf6N2E2_5084 at 5865.480 kb on - strand, within Pf6N2E2_5084 at 5865.480 kb on - strand, within Pf6N2E2_5084 at 5865.480 kb on - strand, within Pf6N2E2_5084 at 5865.542 kb on + strand, within Pf6N2E2_5084 at 5865.629 kb on - strand, within Pf6N2E2_5084 at 5865.804 kb on - strand, within Pf6N2E2_5084 at 5865.804 kb on - strand, within Pf6N2E2_5084 at 5865.824 kb on + strand, within Pf6N2E2_5084 at 5865.824 kb on + strand, within Pf6N2E2_5084 at 5865.824 kb on + strand, within Pf6N2E2_5084 at 5865.824 kb on + strand, within Pf6N2E2_5084 at 5865.824 kb on + strand, within Pf6N2E2_5084 at 5865.824 kb on + strand, within Pf6N2E2_5084 at 5865.824 kb on + strand, within Pf6N2E2_5084 at 5865.824 kb on + strand, within Pf6N2E2_5084 at 5865.824 kb on + strand, within Pf6N2E2_5084 at 5865.825 kb on - strand, within Pf6N2E2_5084 at 5865.825 kb on - strand, within Pf6N2E2_5084 at 5865.825 kb on - strand, within Pf6N2E2_5084 at 5865.825 kb on - strand, within Pf6N2E2_5084 at 5865.825 kb on - strand, within Pf6N2E2_5084 at 5865.825 kb on - strand, within Pf6N2E2_5084 at 5865.825 kb on - strand, within Pf6N2E2_5084 at 5865.825 kb on - strand, within Pf6N2E2_5084 at 5865.825 kb on - strand, within Pf6N2E2_5084 at 5866.085 kb on + strand at 5866.085 kb on + strand at 5866.086 kb on - strand at 5866.086 kb on - strand at 5866.124 kb on + strand at 5866.124 kb on + strand at 5866.124 kb on + strand at 5866.125 kb on - strand at 5866.125 kb on - strand at 5866.125 kb on - strand at 5866.125 kb on - strand at 5866.133 kb on + strand at 5866.133 kb on + strand at 5866.189 kb on - strand at 5866.322 kb on + strand at 5866.323 kb on - strand at 5866.323 kb on - strand at 5866.323 kb on - strand at 5866.529 kb on + strand at 5866.529 kb on + strand at 5866.530 kb on - strand at 5866.530 kb on - strand at 5866.576 kb on + strand, within Pf6N2E2_5085 at 5866.576 kb on + strand, within Pf6N2E2_5085 at 5866.576 kb on + strand, within Pf6N2E2_5085 at 5866.576 kb on + strand, within Pf6N2E2_5085 at 5866.577 kb on - strand, within Pf6N2E2_5085 at 5866.577 kb on - strand, within Pf6N2E2_5085 at 5866.577 kb on - strand, within Pf6N2E2_5085 at 5866.577 kb on - strand, within Pf6N2E2_5085 at 5866.577 kb on - strand, within Pf6N2E2_5085 at 5866.577 kb on - strand, within Pf6N2E2_5085 at 5866.577 kb on - strand, within Pf6N2E2_5085 at 5866.577 kb on - strand, within Pf6N2E2_5085 at 5866.577 kb on - strand, within Pf6N2E2_5085 at 5866.577 kb on - strand, within Pf6N2E2_5085 at 5866.578 kb on + strand, within Pf6N2E2_5085 at 5866.653 kb on + strand, within Pf6N2E2_5085 at 5866.653 kb on + strand, within Pf6N2E2_5085 at 5866.654 kb on - strand, within Pf6N2E2_5085 at 5866.657 kb on + strand, within Pf6N2E2_5085 at 5866.657 kb on + strand, within Pf6N2E2_5085 at 5866.657 kb on + strand, within Pf6N2E2_5085 at 5866.657 kb on + strand, within Pf6N2E2_5085 at 5866.657 kb on + strand, within Pf6N2E2_5085 at 5866.657 kb on + strand, within Pf6N2E2_5085 at 5866.657 kb on + strand, within Pf6N2E2_5085 at 5866.657 kb on + strand, within Pf6N2E2_5085 at 5866.657 kb on + strand, within Pf6N2E2_5085 at 5866.657 kb on + strand, within Pf6N2E2_5085 at 5866.657 kb on + strand, within Pf6N2E2_5085 at 5866.658 kb on - strand, within Pf6N2E2_5085 at 5866.658 kb on - strand, within Pf6N2E2_5085 at 5866.658 kb on - strand, within Pf6N2E2_5085 at 5866.658 kb on - strand, within Pf6N2E2_5085 at 5866.658 kb on - strand, within Pf6N2E2_5085 at 5866.658 kb on - strand, within Pf6N2E2_5085 at 5866.658 kb on - strand, within Pf6N2E2_5085 at 5866.658 kb on - strand, within Pf6N2E2_5085 at 5866.658 kb on - strand, within Pf6N2E2_5085 at 5866.660 kb on - strand, within Pf6N2E2_5085 at 5866.689 kb on + strand, within Pf6N2E2_5085 at 5866.689 kb on + strand, within Pf6N2E2_5085 at 5866.689 kb on + strand, within Pf6N2E2_5085 at 5866.689 kb on + strand, within Pf6N2E2_5085 at 5866.690 kb on - strand, within Pf6N2E2_5085 at 5866.690 kb on - strand, within Pf6N2E2_5085 at 5866.690 kb on - strand, within Pf6N2E2_5085 at 5866.690 kb on - strand, within Pf6N2E2_5085 at 5866.690 kb on - strand, within Pf6N2E2_5085 at 5866.690 kb on - strand, within Pf6N2E2_5085 at 5866.690 kb on - strand, within Pf6N2E2_5085 at 5866.808 kb on + strand, within Pf6N2E2_5085 at 5866.808 kb on + strand, within Pf6N2E2_5085 at 5866.809 kb on - strand, within Pf6N2E2_5085 at 5866.815 kb on + strand, within Pf6N2E2_5085 at 5866.928 kb on + strand, within Pf6N2E2_5085 at 5866.929 kb on - strand, within Pf6N2E2_5085 at 5866.984 kb on + strand, within Pf6N2E2_5085 at 5866.987 kb on - strand, within Pf6N2E2_5085 at 5867.039 kb on + strand, within Pf6N2E2_5085 at 5867.039 kb on + strand, within Pf6N2E2_5085 at 5867.138 kb on + strand, within Pf6N2E2_5085 at 5867.138 kb on + strand, within Pf6N2E2_5085 at 5867.138 kb on + strand, within Pf6N2E2_5085 at 5867.139 kb on - strand, within Pf6N2E2_5085 at 5867.139 kb on - strand, within Pf6N2E2_5085 at 5867.144 kb on + strand, within Pf6N2E2_5085 at 5867.144 kb on + strand, within Pf6N2E2_5085 at 5867.145 kb on - strand, within Pf6N2E2_5085 at 5867.145 kb on - strand, within Pf6N2E2_5085 at 5867.145 kb on - strand, within Pf6N2E2_5085 at 5867.163 kb on - strand, within Pf6N2E2_5085
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 5,863,576 + Pf6N2E2_5083 0.83 +0.0 5,863,577 - Pf6N2E2_5083 0.83 -0.5 5,863,789 + Pf6N2E2_5083 0.89 +0.5 5,863,789 + Pf6N2E2_5083 0.89 +0.5 5,863,789 + Pf6N2E2_5083 0.89 +0.2 5,863,789 + Pf6N2E2_5083 0.89 +0.6 5,863,789 + Pf6N2E2_5083 0.89 -0.2 5,863,789 + Pf6N2E2_5083 0.89 -0.1 5,863,789 + Pf6N2E2_5083 0.89 -0.9 5,863,789 + Pf6N2E2_5083 0.89 -0.1 5,863,789 + Pf6N2E2_5083 0.89 +0.1 5,863,789 + Pf6N2E2_5083 0.89 +0.2 5,863,790 - Pf6N2E2_5083 0.89 +0.6 5,863,790 - Pf6N2E2_5083 0.89 -0.6 5,863,790 - Pf6N2E2_5083 0.89 +0.4 5,863,790 - Pf6N2E2_5083 0.89 +0.6 5,863,790 - Pf6N2E2_5083 0.89 -0.0 5,863,790 - Pf6N2E2_5083 0.89 -0.7 5,863,790 - Pf6N2E2_5083 0.89 -0.3 5,863,790 - Pf6N2E2_5083 0.89 +0.1 5,863,868 + -0.5 5,863,869 - +1.0 5,863,869 - -0.4 5,864,090 + -0.4 5,864,090 + +0.4 5,864,090 + -0.4 5,864,090 + +0.5 5,864,090 + +0.3 5,864,090 + -0.4 5,864,091 - -0.5 5,864,091 - +0.4 5,864,102 + -0.4 5,864,102 + +1.2 5,864,102 + +0.3 5,864,102 + -0.1 5,864,102 + -0.0 5,864,102 + +0.6 5,864,103 - +0.3 5,864,103 - +1.0 5,864,103 - -0.7 5,864,103 - +0.4 5,864,103 - +0.8 5,864,103 - +0.4 5,864,103 - -0.1 5,864,103 - -0.1 5,864,280 - -1.2 5,864,315 + +0.0 5,864,315 + -0.5 5,864,315 + -0.3 5,864,316 - -0.7 5,864,316 - +0.4 5,864,316 - -0.2 5,864,316 - -0.1 5,864,316 - +0.4 5,864,317 + -0.0 5,864,317 + +0.0 5,864,317 + +0.7 5,864,318 - +0.8 5,864,456 - -1.3 5,864,536 + -0.5 5,864,537 - -1.1 5,864,555 + -0.8 5,864,555 + -0.1 5,864,555 + -3.0 5,864,555 + -2.2 5,864,555 + -2.3 5,864,556 - -0.3 5,864,556 - +0.1 5,864,556 - -0.4 5,864,556 - -0.7 5,864,563 + -1.4 5,864,564 - -1.0 5,864,564 - -0.3 5,864,564 - -0.6 5,864,564 - -0.7 5,864,617 + -1.6 5,864,656 - -1.0 5,864,868 - Pf6N2E2_5084 0.19 -0.8 5,864,877 - Pf6N2E2_5084 0.20 -0.3 5,865,203 + Pf6N2E2_5084 0.39 -0.3 5,865,203 + Pf6N2E2_5084 0.39 -0.4 5,865,203 + Pf6N2E2_5084 0.39 +0.2 5,865,204 - Pf6N2E2_5084 0.40 -2.8 5,865,263 + Pf6N2E2_5084 0.43 -0.7 5,865,275 + Pf6N2E2_5084 0.44 -0.2 5,865,275 + Pf6N2E2_5084 0.44 +0.4 5,865,275 + Pf6N2E2_5084 0.44 -2.0 5,865,479 + Pf6N2E2_5084 0.56 -0.7 5,865,479 + Pf6N2E2_5084 0.56 -1.9 5,865,480 - Pf6N2E2_5084 0.56 -1.0 5,865,480 - Pf6N2E2_5084 0.56 -1.1 5,865,480 - Pf6N2E2_5084 0.56 -1.1 5,865,480 - Pf6N2E2_5084 0.56 -0.1 5,865,480 - Pf6N2E2_5084 0.56 +0.2 5,865,480 - Pf6N2E2_5084 0.56 -1.3 5,865,542 + Pf6N2E2_5084 0.60 -1.0 5,865,629 - Pf6N2E2_5084 0.65 -0.6 5,865,804 - Pf6N2E2_5084 0.76 -1.2 5,865,804 - Pf6N2E2_5084 0.76 -0.1 5,865,824 + Pf6N2E2_5084 0.77 -1.9 5,865,824 + Pf6N2E2_5084 0.77 -1.1 5,865,824 + Pf6N2E2_5084 0.77 -0.6 5,865,824 + Pf6N2E2_5084 0.77 +0.4 5,865,824 + Pf6N2E2_5084 0.77 -3.1 5,865,824 + Pf6N2E2_5084 0.77 -4.0 5,865,824 + Pf6N2E2_5084 0.77 -1.4 5,865,824 + Pf6N2E2_5084 0.77 -0.6 5,865,824 + Pf6N2E2_5084 0.77 -0.6 5,865,825 - Pf6N2E2_5084 0.77 -0.0 5,865,825 - Pf6N2E2_5084 0.77 -1.3 5,865,825 - Pf6N2E2_5084 0.77 -0.0 5,865,825 - Pf6N2E2_5084 0.77 -1.7 5,865,825 - Pf6N2E2_5084 0.77 -1.2 5,865,825 - Pf6N2E2_5084 0.77 -0.7 5,865,825 - Pf6N2E2_5084 0.77 -1.4 5,865,825 - Pf6N2E2_5084 0.77 -2.8 5,865,825 - Pf6N2E2_5084 0.77 -0.3 5,866,085 + +0.2 5,866,085 + +0.4 5,866,086 - -0.4 5,866,086 - -0.5 5,866,124 + +0.1 5,866,124 + -1.6 5,866,124 + -0.9 5,866,125 - -0.8 5,866,125 - -0.4 5,866,125 - -0.6 5,866,125 - -0.2 5,866,133 + -0.7 5,866,133 + +0.2 5,866,189 - -1.0 5,866,322 + -0.3 5,866,323 - -0.5 5,866,323 - -0.3 5,866,323 - -0.2 5,866,529 + -0.4 5,866,529 + +1.2 5,866,530 - -1.2 5,866,530 - +0.9 5,866,576 + Pf6N2E2_5085 0.10 +1.0 5,866,576 + Pf6N2E2_5085 0.10 -0.6 5,866,576 + Pf6N2E2_5085 0.10 -0.1 5,866,576 + Pf6N2E2_5085 0.10 +0.8 5,866,577 - Pf6N2E2_5085 0.10 +0.4 5,866,577 - Pf6N2E2_5085 0.10 +0.8 5,866,577 - Pf6N2E2_5085 0.10 +0.7 5,866,577 - Pf6N2E2_5085 0.10 +0.7 5,866,577 - Pf6N2E2_5085 0.10 +0.3 5,866,577 - Pf6N2E2_5085 0.10 -1.4 5,866,577 - Pf6N2E2_5085 0.10 -0.8 5,866,577 - Pf6N2E2_5085 0.10 -0.0 5,866,577 - Pf6N2E2_5085 0.10 +0.6 5,866,577 - Pf6N2E2_5085 0.10 -0.6 5,866,578 + Pf6N2E2_5085 0.10 -0.1 5,866,653 + Pf6N2E2_5085 0.13 +1.0 5,866,653 + Pf6N2E2_5085 0.13 +1.3 5,866,654 - Pf6N2E2_5085 0.13 +0.3 5,866,657 + Pf6N2E2_5085 0.13 -0.3 5,866,657 + Pf6N2E2_5085 0.13 -0.1 5,866,657 + Pf6N2E2_5085 0.13 +0.9 5,866,657 + Pf6N2E2_5085 0.13 +0.5 5,866,657 + Pf6N2E2_5085 0.13 -0.1 5,866,657 + Pf6N2E2_5085 0.13 +1.0 5,866,657 + Pf6N2E2_5085 0.13 +0.7 5,866,657 + Pf6N2E2_5085 0.13 -1.4 5,866,657 + Pf6N2E2_5085 0.13 +0.8 5,866,657 + Pf6N2E2_5085 0.13 +0.1 5,866,657 + Pf6N2E2_5085 0.13 -1.2 5,866,658 - Pf6N2E2_5085 0.13 +0.8 5,866,658 - Pf6N2E2_5085 0.13 -0.1 5,866,658 - Pf6N2E2_5085 0.13 +0.8 5,866,658 - Pf6N2E2_5085 0.13 -1.6 5,866,658 - Pf6N2E2_5085 0.13 -0.6 5,866,658 - Pf6N2E2_5085 0.13 +0.5 5,866,658 - Pf6N2E2_5085 0.13 +0.5 5,866,658 - Pf6N2E2_5085 0.13 +0.7 5,866,658 - Pf6N2E2_5085 0.13 -0.4 5,866,660 - Pf6N2E2_5085 0.13 +0.1 5,866,689 + Pf6N2E2_5085 0.14 +1.6 5,866,689 + Pf6N2E2_5085 0.14 +0.5 5,866,689 + Pf6N2E2_5085 0.14 +0.5 5,866,689 + Pf6N2E2_5085 0.14 +0.6 5,866,690 - Pf6N2E2_5085 0.14 -0.3 5,866,690 - Pf6N2E2_5085 0.14 +0.4 5,866,690 - Pf6N2E2_5085 0.14 +0.8 5,866,690 - Pf6N2E2_5085 0.14 +0.1 5,866,690 - Pf6N2E2_5085 0.14 +0.4 5,866,690 - Pf6N2E2_5085 0.14 +0.5 5,866,690 - Pf6N2E2_5085 0.14 +1.2 5,866,808 + Pf6N2E2_5085 0.18 +0.8 5,866,808 + Pf6N2E2_5085 0.18 -1.3 5,866,809 - Pf6N2E2_5085 0.18 -0.0 5,866,815 + Pf6N2E2_5085 0.18 -0.1 5,866,928 + Pf6N2E2_5085 0.22 -0.2 5,866,929 - Pf6N2E2_5085 0.22 +0.7 5,866,984 + Pf6N2E2_5085 0.23 +0.1 5,866,987 - Pf6N2E2_5085 0.23 +0.2 5,867,039 + Pf6N2E2_5085 0.25 +0.6 5,867,039 + Pf6N2E2_5085 0.25 +1.2 5,867,138 + Pf6N2E2_5085 0.28 +0.7 5,867,138 + Pf6N2E2_5085 0.28 +0.2 5,867,138 + Pf6N2E2_5085 0.28 -0.2 5,867,139 - Pf6N2E2_5085 0.28 -1.6 5,867,139 - Pf6N2E2_5085 0.28 +1.2 5,867,144 + Pf6N2E2_5085 0.29 -1.4 5,867,144 + Pf6N2E2_5085 0.29 -1.3 5,867,145 - Pf6N2E2_5085 0.29 -0.1 5,867,145 - Pf6N2E2_5085 0.29 -2.1 5,867,145 - Pf6N2E2_5085 0.29 +0.4 5,867,163 - Pf6N2E2_5085 0.29 +0.4
Or see this region's nucleotide sequence