Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4372 and Pf6N2E2_4373 are separated by 53 nucleotides Pf6N2E2_4373 and Pf6N2E2_4374 are separated by 27 nucleotides Pf6N2E2_4374 and Pf6N2E2_4375 are separated by 257 nucleotides Pf6N2E2_4375 and Pf6N2E2_4376 are separated by 4 nucleotides
Pf6N2E2_4372 - FIG00460773: hypothetical protein, at 5,100,511 to 5,101,755
_4372
Pf6N2E2_4373 - Acetylglutamate kinase (EC 2.7.2.8), at 5,101,809 to 5,102,714
_4373
Pf6N2E2_4374 - Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2), at 5,102,742 to 5,104,139
_4374
Pf6N2E2_4375 - Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23), at 5,104,397 to 5,104,852
_4375
Pf6N2E2_4376 - Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5), at 5,104,857 to 5,106,065
_4376
Position (kb) 5102
5103
5104
5105 Strain fitness (log2 ratio) -1
0
1 at 5101.779 kb on + strand at 5101.780 kb on - strand at 5101.780 kb on - strand at 5101.780 kb on - strand at 5101.810 kb on + strand at 5101.811 kb on - strand at 5101.811 kb on - strand at 5101.811 kb on - strand at 5101.839 kb on - strand at 5101.839 kb on - strand at 5101.839 kb on - strand at 5102.752 kb on - strand at 5102.752 kb on - strand at 5102.752 kb on - strand at 5102.752 kb on - strand at 5102.845 kb on - strand at 5103.002 kb on + strand, within Pf6N2E2_4374 at 5103.002 kb on + strand, within Pf6N2E2_4374 at 5103.017 kb on + strand, within Pf6N2E2_4374 at 5103.018 kb on - strand, within Pf6N2E2_4374 at 5103.018 kb on - strand, within Pf6N2E2_4374 at 5103.024 kb on - strand, within Pf6N2E2_4374 at 5103.024 kb on - strand, within Pf6N2E2_4374 at 5103.103 kb on + strand, within Pf6N2E2_4374 at 5103.103 kb on + strand, within Pf6N2E2_4374 at 5103.103 kb on + strand, within Pf6N2E2_4374 at 5103.103 kb on + strand, within Pf6N2E2_4374 at 5103.103 kb on + strand, within Pf6N2E2_4374 at 5103.103 kb on + strand, within Pf6N2E2_4374 at 5103.103 kb on + strand, within Pf6N2E2_4374 at 5103.103 kb on + strand, within Pf6N2E2_4374 at 5103.104 kb on - strand, within Pf6N2E2_4374 at 5103.104 kb on - strand, within Pf6N2E2_4374 at 5103.104 kb on - strand, within Pf6N2E2_4374 at 5103.282 kb on - strand, within Pf6N2E2_4374 at 5103.658 kb on + strand, within Pf6N2E2_4374 at 5103.659 kb on - strand, within Pf6N2E2_4374 at 5103.659 kb on - strand, within Pf6N2E2_4374 at 5103.793 kb on + strand, within Pf6N2E2_4374 at 5103.793 kb on + strand, within Pf6N2E2_4374 at 5103.793 kb on + strand, within Pf6N2E2_4374 at 5103.793 kb on + strand, within Pf6N2E2_4374 at 5103.794 kb on - strand, within Pf6N2E2_4374 at 5103.859 kb on + strand, within Pf6N2E2_4374 at 5103.860 kb on - strand, within Pf6N2E2_4374 at 5103.862 kb on + strand, within Pf6N2E2_4374 at 5103.862 kb on + strand, within Pf6N2E2_4374 at 5103.862 kb on + strand, within Pf6N2E2_4374 at 5103.862 kb on + strand, within Pf6N2E2_4374 at 5103.863 kb on - strand, within Pf6N2E2_4374 at 5103.863 kb on - strand, within Pf6N2E2_4374 at 5103.927 kb on + strand, within Pf6N2E2_4374 at 5103.928 kb on - strand, within Pf6N2E2_4374 at 5103.928 kb on - strand, within Pf6N2E2_4374 at 5104.084 kb on + strand at 5104.153 kb on + strand at 5104.211 kb on + strand at 5104.211 kb on + strand at 5104.285 kb on + strand at 5104.285 kb on + strand at 5104.286 kb on - strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.288 kb on + strand at 5104.289 kb on - strand at 5104.289 kb on - strand at 5104.289 kb on - strand at 5104.289 kb on - strand at 5104.289 kb on - strand at 5104.313 kb on - strand at 5104.313 kb on - strand at 5104.859 kb on - strand at 5104.859 kb on - strand at 5104.859 kb on - strand at 5104.859 kb on - strand at 5104.859 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 5,101,779 + +0.3 5,101,780 - -0.8 5,101,780 - +0.5 5,101,780 - +0.8 5,101,810 + +0.1 5,101,811 - -0.4 5,101,811 - -1.0 5,101,811 - +0.1 5,101,839 - -0.6 5,101,839 - -1.2 5,101,839 - -0.4 5,102,752 - +0.7 5,102,752 - +0.2 5,102,752 - +0.5 5,102,752 - +0.5 5,102,845 - -0.0 5,103,002 + Pf6N2E2_4374 0.19 +0.6 5,103,002 + Pf6N2E2_4374 0.19 -0.5 5,103,017 + Pf6N2E2_4374 0.20 -0.8 5,103,018 - Pf6N2E2_4374 0.20 +0.4 5,103,018 - Pf6N2E2_4374 0.20 +0.0 5,103,024 - Pf6N2E2_4374 0.20 -0.7 5,103,024 - Pf6N2E2_4374 0.20 +1.5 5,103,103 + Pf6N2E2_4374 0.26 +0.4 5,103,103 + Pf6N2E2_4374 0.26 -0.0 5,103,103 + Pf6N2E2_4374 0.26 -0.3 5,103,103 + Pf6N2E2_4374 0.26 +1.5 5,103,103 + Pf6N2E2_4374 0.26 +1.0 5,103,103 + Pf6N2E2_4374 0.26 +0.2 5,103,103 + Pf6N2E2_4374 0.26 -0.3 5,103,103 + Pf6N2E2_4374 0.26 +0.2 5,103,104 - Pf6N2E2_4374 0.26 +1.1 5,103,104 - Pf6N2E2_4374 0.26 +0.2 5,103,104 - Pf6N2E2_4374 0.26 +0.6 5,103,282 - Pf6N2E2_4374 0.39 +0.5 5,103,658 + Pf6N2E2_4374 0.66 -0.0 5,103,659 - Pf6N2E2_4374 0.66 -0.6 5,103,659 - Pf6N2E2_4374 0.66 +1.2 5,103,793 + Pf6N2E2_4374 0.75 +0.7 5,103,793 + Pf6N2E2_4374 0.75 -0.5 5,103,793 + Pf6N2E2_4374 0.75 +0.6 5,103,793 + Pf6N2E2_4374 0.75 +0.3 5,103,794 - Pf6N2E2_4374 0.75 +0.7 5,103,859 + Pf6N2E2_4374 0.80 +0.1 5,103,860 - Pf6N2E2_4374 0.80 -0.6 5,103,862 + Pf6N2E2_4374 0.80 +1.1 5,103,862 + Pf6N2E2_4374 0.80 -0.1 5,103,862 + Pf6N2E2_4374 0.80 -0.2 5,103,862 + Pf6N2E2_4374 0.80 -0.2 5,103,863 - Pf6N2E2_4374 0.80 -1.2 5,103,863 - Pf6N2E2_4374 0.80 -0.9 5,103,927 + Pf6N2E2_4374 0.85 +0.4 5,103,928 - Pf6N2E2_4374 0.85 +1.0 5,103,928 - Pf6N2E2_4374 0.85 +0.8 5,104,084 + -0.3 5,104,153 + +0.1 5,104,211 + -0.0 5,104,211 + -1.0 5,104,285 + -0.5 5,104,285 + -0.5 5,104,286 - -0.3 5,104,288 + +1.0 5,104,288 + -0.9 5,104,288 + -0.5 5,104,288 + +0.5 5,104,288 + +0.2 5,104,288 + +0.8 5,104,288 + -0.5 5,104,288 + +0.3 5,104,288 + -1.1 5,104,288 + +1.1 5,104,288 + -0.4 5,104,288 + -0.3 5,104,288 + +0.8 5,104,288 + +0.6 5,104,288 + -0.7 5,104,288 + +0.1 5,104,289 - +0.1 5,104,289 - +1.4 5,104,289 - +1.1 5,104,289 - -0.1 5,104,289 - +0.7 5,104,313 - +0.2 5,104,313 - +0.6 5,104,859 - +0.5 5,104,859 - +0.5 5,104,859 - +0.2 5,104,859 - -0.3 5,104,859 - +0.7
Or see this region's nucleotide sequence