Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4352 and Pf6N2E2_4353 are separated by 9 nucleotides Pf6N2E2_4353 and Pf6N2E2_4354 are separated by 324 nucleotides
Pf6N2E2_4352 - ATP-dependent DNA helicase RecG (EC 3.6.1.-), at 5,082,017 to 5,084,092
_4352
Pf6N2E2_4353 - Hydrogen peroxide-inducible genes activator, at 5,084,102 to 5,085,022
_4353
Pf6N2E2_4354 - Ferric siderophore transport system, periplasmic binding protein TonB, at 5,085,347 to 5,086,102
_4354
Position (kb)
5084
5085
5086 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5083.701 kb on + strand, within Pf6N2E2_4352 at 5083.713 kb on + strand, within Pf6N2E2_4352 at 5083.713 kb on + strand, within Pf6N2E2_4352 at 5083.713 kb on + strand, within Pf6N2E2_4352 at 5083.713 kb on + strand, within Pf6N2E2_4352 at 5083.714 kb on - strand, within Pf6N2E2_4352 at 5083.714 kb on - strand, within Pf6N2E2_4352 at 5083.809 kb on + strand, within Pf6N2E2_4352 at 5083.931 kb on + strand at 5083.932 kb on - strand at 5084.103 kb on + strand at 5084.103 kb on + strand at 5084.104 kb on - strand at 5084.104 kb on - strand at 5084.104 kb on - strand at 5084.263 kb on - strand, within Pf6N2E2_4353 at 5084.303 kb on - strand, within Pf6N2E2_4353 at 5084.527 kb on - strand, within Pf6N2E2_4353 at 5084.527 kb on - strand, within Pf6N2E2_4353 at 5084.527 kb on - strand, within Pf6N2E2_4353 at 5084.527 kb on - strand, within Pf6N2E2_4353 at 5084.542 kb on - strand, within Pf6N2E2_4353 at 5084.655 kb on + strand, within Pf6N2E2_4353 at 5085.001 kb on - strand at 5085.001 kb on - strand at 5085.006 kb on - strand at 5085.006 kb on - strand at 5085.054 kb on + strand at 5085.055 kb on - strand at 5085.175 kb on + strand at 5085.175 kb on + strand at 5085.175 kb on + strand at 5085.175 kb on + strand at 5085.175 kb on + strand at 5085.175 kb on + strand at 5085.175 kb on + strand at 5085.175 kb on + strand at 5085.175 kb on + strand at 5085.175 kb on + strand at 5085.175 kb on + strand at 5085.176 kb on - strand at 5085.176 kb on - strand at 5085.176 kb on - strand at 5085.180 kb on - strand at 5085.180 kb on - strand at 5085.180 kb on - strand at 5085.180 kb on - strand at 5085.180 kb on - strand at 5085.180 kb on - strand at 5085.180 kb on - strand at 5085.245 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 5,083,701 + Pf6N2E2_4352 0.81 -3.0 5,083,713 + Pf6N2E2_4352 0.82 -1.1 5,083,713 + Pf6N2E2_4352 0.82 -0.4 5,083,713 + Pf6N2E2_4352 0.82 -0.8 5,083,713 + Pf6N2E2_4352 0.82 +1.9 5,083,714 - Pf6N2E2_4352 0.82 -0.1 5,083,714 - Pf6N2E2_4352 0.82 -1.6 5,083,809 + Pf6N2E2_4352 0.86 -2.2 5,083,931 + -3.1 5,083,932 - -2.3 5,084,103 + -1.3 5,084,103 + -0.6 5,084,104 - +0.5 5,084,104 - +0.3 5,084,104 - -0.3 5,084,263 - Pf6N2E2_4353 0.17 +0.0 5,084,303 - Pf6N2E2_4353 0.22 -0.6 5,084,527 - Pf6N2E2_4353 0.46 -1.1 5,084,527 - Pf6N2E2_4353 0.46 -0.7 5,084,527 - Pf6N2E2_4353 0.46 -0.2 5,084,527 - Pf6N2E2_4353 0.46 -0.4 5,084,542 - Pf6N2E2_4353 0.48 -0.4 5,084,655 + Pf6N2E2_4353 0.60 -2.4 5,085,001 - -0.0 5,085,001 - -1.5 5,085,006 - -1.2 5,085,006 - -1.5 5,085,054 + -0.2 5,085,055 - +0.1 5,085,175 + +0.4 5,085,175 + +0.9 5,085,175 + +0.2 5,085,175 + -0.1 5,085,175 + +0.5 5,085,175 + -0.2 5,085,175 + +0.0 5,085,175 + -0.2 5,085,175 + +0.8 5,085,175 + +0.5 5,085,175 + +0.0 5,085,176 - +0.7 5,085,176 - -0.9 5,085,176 - +0.3 5,085,180 - +0.5 5,085,180 - -0.5 5,085,180 - +0.2 5,085,180 - +0.0 5,085,180 - +0.1 5,085,180 - +0.1 5,085,180 - +0.9 5,085,245 - -1.2
Or see this region's nucleotide sequence