Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4339 and Pf6N2E2_4340 are separated by 6 nucleotides Pf6N2E2_4340 and Pf6N2E2_4341 overlap by 4 nucleotides
Pf6N2E2_4339 - Uncharacterized protein ImpJ/VasE, at 5,061,809 to 5,063,143
_4339
Pf6N2E2_4340 - Outer membrane protein ImpK/VasF, OmpA/MotB domain, at 5,063,150 to 5,064,460
_4340
Pf6N2E2_4341 - IcmF-related protein, at 5,064,457 to 5,067,957
_4341
Position (kb)
5063
5064
5065 Strain fitness (log2 ratio)
-1
0
1
2
3 at 5062.178 kb on + strand, within Pf6N2E2_4339 at 5062.178 kb on + strand, within Pf6N2E2_4339 at 5062.179 kb on - strand, within Pf6N2E2_4339 at 5062.179 kb on - strand, within Pf6N2E2_4339 at 5062.179 kb on - strand, within Pf6N2E2_4339 at 5062.179 kb on - strand, within Pf6N2E2_4339 at 5062.179 kb on - strand, within Pf6N2E2_4339 at 5062.179 kb on - strand, within Pf6N2E2_4339 at 5062.295 kb on + strand, within Pf6N2E2_4339 at 5062.364 kb on + strand, within Pf6N2E2_4339 at 5062.364 kb on + strand, within Pf6N2E2_4339 at 5062.364 kb on + strand, within Pf6N2E2_4339 at 5062.364 kb on + strand, within Pf6N2E2_4339 at 5062.364 kb on + strand, within Pf6N2E2_4339 at 5062.364 kb on + strand, within Pf6N2E2_4339 at 5062.364 kb on + strand, within Pf6N2E2_4339 at 5062.365 kb on - strand, within Pf6N2E2_4339 at 5062.365 kb on - strand, within Pf6N2E2_4339 at 5062.365 kb on - strand, within Pf6N2E2_4339 at 5062.365 kb on - strand, within Pf6N2E2_4339 at 5062.365 kb on - strand, within Pf6N2E2_4339 at 5062.365 kb on - strand, within Pf6N2E2_4339 at 5062.365 kb on - strand, within Pf6N2E2_4339 at 5062.365 kb on - strand, within Pf6N2E2_4339 at 5062.595 kb on + strand, within Pf6N2E2_4339 at 5062.595 kb on + strand, within Pf6N2E2_4339 at 5062.673 kb on + strand, within Pf6N2E2_4339 at 5062.700 kb on + strand, within Pf6N2E2_4339 at 5062.700 kb on + strand, within Pf6N2E2_4339 at 5062.701 kb on - strand, within Pf6N2E2_4339 at 5062.787 kb on + strand, within Pf6N2E2_4339 at 5063.003 kb on + strand, within Pf6N2E2_4339 at 5063.021 kb on + strand at 5063.021 kb on + strand at 5063.022 kb on - strand at 5063.024 kb on + strand at 5063.024 kb on + strand at 5063.024 kb on + strand at 5063.025 kb on - strand at 5063.025 kb on - strand at 5063.025 kb on - strand at 5063.025 kb on - strand at 5063.025 kb on - strand at 5063.167 kb on + strand at 5063.648 kb on + strand, within Pf6N2E2_4340 at 5063.648 kb on + strand, within Pf6N2E2_4340 at 5063.648 kb on + strand, within Pf6N2E2_4340 at 5063.648 kb on + strand, within Pf6N2E2_4340 at 5063.648 kb on + strand, within Pf6N2E2_4340 at 5063.649 kb on - strand, within Pf6N2E2_4340 at 5063.667 kb on - strand, within Pf6N2E2_4340 at 5063.783 kb on + strand, within Pf6N2E2_4340 at 5063.784 kb on - strand, within Pf6N2E2_4340 at 5064.438 kb on + strand at 5064.439 kb on - strand at 5064.439 kb on - strand at 5064.477 kb on + strand at 5064.477 kb on + strand at 5064.477 kb on + strand at 5064.478 kb on - strand at 5064.478 kb on - strand at 5064.478 kb on - strand at 5064.596 kb on + strand at 5064.596 kb on + strand at 5064.596 kb on + strand at 5064.597 kb on - strand at 5064.597 kb on - strand at 5064.811 kb on + strand, within Pf6N2E2_4341 at 5064.811 kb on + strand, within Pf6N2E2_4341 at 5064.811 kb on + strand, within Pf6N2E2_4341 at 5064.812 kb on - strand, within Pf6N2E2_4341 at 5064.826 kb on + strand, within Pf6N2E2_4341 at 5064.826 kb on + strand, within Pf6N2E2_4341 at 5065.000 kb on + strand, within Pf6N2E2_4341 at 5065.001 kb on - strand, within Pf6N2E2_4341 at 5065.001 kb on - strand, within Pf6N2E2_4341 at 5065.001 kb on - strand, within Pf6N2E2_4341 at 5065.006 kb on - strand, within Pf6N2E2_4341 at 5065.195 kb on + strand, within Pf6N2E2_4341 at 5065.195 kb on + strand, within Pf6N2E2_4341 at 5065.196 kb on - strand, within Pf6N2E2_4341 at 5065.225 kb on + strand, within Pf6N2E2_4341 at 5065.225 kb on + strand, within Pf6N2E2_4341 at 5065.226 kb on - strand, within Pf6N2E2_4341 at 5065.270 kb on + strand, within Pf6N2E2_4341 at 5065.270 kb on + strand, within Pf6N2E2_4341 at 5065.270 kb on + strand, within Pf6N2E2_4341 at 5065.270 kb on + strand, within Pf6N2E2_4341 at 5065.271 kb on - strand, within Pf6N2E2_4341 at 5065.271 kb on - strand, within Pf6N2E2_4341
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 5,062,178 + Pf6N2E2_4339 0.28 +0.9 5,062,178 + Pf6N2E2_4339 0.28 +0.2 5,062,179 - Pf6N2E2_4339 0.28 -0.4 5,062,179 - Pf6N2E2_4339 0.28 +0.6 5,062,179 - Pf6N2E2_4339 0.28 +0.0 5,062,179 - Pf6N2E2_4339 0.28 +0.7 5,062,179 - Pf6N2E2_4339 0.28 +0.3 5,062,179 - Pf6N2E2_4339 0.28 +0.4 5,062,295 + Pf6N2E2_4339 0.36 +0.5 5,062,364 + Pf6N2E2_4339 0.42 -0.0 5,062,364 + Pf6N2E2_4339 0.42 -0.1 5,062,364 + Pf6N2E2_4339 0.42 -0.3 5,062,364 + Pf6N2E2_4339 0.42 +1.4 5,062,364 + Pf6N2E2_4339 0.42 +0.4 5,062,364 + Pf6N2E2_4339 0.42 +0.4 5,062,364 + Pf6N2E2_4339 0.42 +0.7 5,062,365 - Pf6N2E2_4339 0.42 -0.1 5,062,365 - Pf6N2E2_4339 0.42 -0.2 5,062,365 - Pf6N2E2_4339 0.42 -1.7 5,062,365 - Pf6N2E2_4339 0.42 +0.2 5,062,365 - Pf6N2E2_4339 0.42 +0.6 5,062,365 - Pf6N2E2_4339 0.42 +1.5 5,062,365 - Pf6N2E2_4339 0.42 +0.0 5,062,365 - Pf6N2E2_4339 0.42 +0.4 5,062,595 + Pf6N2E2_4339 0.59 +0.7 5,062,595 + Pf6N2E2_4339 0.59 -0.5 5,062,673 + Pf6N2E2_4339 0.65 -0.5 5,062,700 + Pf6N2E2_4339 0.67 +0.0 5,062,700 + Pf6N2E2_4339 0.67 +0.3 5,062,701 - Pf6N2E2_4339 0.67 +0.4 5,062,787 + Pf6N2E2_4339 0.73 +0.2 5,063,003 + Pf6N2E2_4339 0.89 -0.1 5,063,021 + -0.1 5,063,021 + +0.2 5,063,022 - -1.1 5,063,024 + +1.1 5,063,024 + -0.7 5,063,024 + +0.5 5,063,025 - +0.8 5,063,025 - +0.2 5,063,025 - +3.1 5,063,025 - -0.8 5,063,025 - +0.6 5,063,167 + +0.1 5,063,648 + Pf6N2E2_4340 0.38 -0.2 5,063,648 + Pf6N2E2_4340 0.38 +1.2 5,063,648 + Pf6N2E2_4340 0.38 +1.2 5,063,648 + Pf6N2E2_4340 0.38 +0.7 5,063,648 + Pf6N2E2_4340 0.38 +0.6 5,063,649 - Pf6N2E2_4340 0.38 +0.3 5,063,667 - Pf6N2E2_4340 0.39 +1.2 5,063,783 + Pf6N2E2_4340 0.48 +0.4 5,063,784 - Pf6N2E2_4340 0.48 -0.0 5,064,438 + +0.6 5,064,439 - +1.5 5,064,439 - +0.2 5,064,477 + +0.2 5,064,477 + -0.6 5,064,477 + +0.3 5,064,478 - +0.3 5,064,478 - +1.3 5,064,478 - +0.4 5,064,596 + +0.2 5,064,596 + -0.3 5,064,596 + -0.7 5,064,597 - +0.3 5,064,597 - +2.1 5,064,811 + Pf6N2E2_4341 0.10 +0.5 5,064,811 + Pf6N2E2_4341 0.10 +0.7 5,064,811 + Pf6N2E2_4341 0.10 +0.5 5,064,812 - Pf6N2E2_4341 0.10 -0.5 5,064,826 + Pf6N2E2_4341 0.11 -0.7 5,064,826 + Pf6N2E2_4341 0.11 +0.6 5,065,000 + Pf6N2E2_4341 0.16 +0.8 5,065,001 - Pf6N2E2_4341 0.16 +0.8 5,065,001 - Pf6N2E2_4341 0.16 -0.1 5,065,001 - Pf6N2E2_4341 0.16 -0.1 5,065,006 - Pf6N2E2_4341 0.16 -0.4 5,065,195 + Pf6N2E2_4341 0.21 +0.3 5,065,195 + Pf6N2E2_4341 0.21 +0.7 5,065,196 - Pf6N2E2_4341 0.21 +0.1 5,065,225 + Pf6N2E2_4341 0.22 +0.7 5,065,225 + Pf6N2E2_4341 0.22 +0.1 5,065,226 - Pf6N2E2_4341 0.22 +0.8 5,065,270 + Pf6N2E2_4341 0.23 -0.4 5,065,270 + Pf6N2E2_4341 0.23 -0.4 5,065,270 + Pf6N2E2_4341 0.23 -0.3 5,065,270 + Pf6N2E2_4341 0.23 -0.1 5,065,271 - Pf6N2E2_4341 0.23 +0.2 5,065,271 - Pf6N2E2_4341 0.23 -0.4
Or see this region's nucleotide sequence