Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4254 and Pf6N2E2_4255 overlap by 4 nucleotides Pf6N2E2_4255 and Pf6N2E2_4256 are separated by 309 nucleotides
Pf6N2E2_4254 - HflK protein, at 4,950,879 to 4,951,931
_4254
Pf6N2E2_4255 - Probable cadmium-transporting ATPase (EC 3.6.3.3), at 4,951,928 to 4,953,847
_4255
Pf6N2E2_4256 - Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79), at 4,954,157 to 4,955,218
_4256
Position (kb)
4951
4952
4953
4954 Strain fitness (log2 ratio)
-1
0
1
2 at 4950.957 kb on + strand at 4950.958 kb on - strand at 4951.245 kb on + strand, within Pf6N2E2_4254 at 4951.246 kb on - strand, within Pf6N2E2_4254 at 4951.249 kb on + strand, within Pf6N2E2_4254 at 4951.249 kb on + strand, within Pf6N2E2_4254 at 4951.250 kb on - strand, within Pf6N2E2_4254 at 4951.250 kb on - strand, within Pf6N2E2_4254 at 4951.296 kb on + strand, within Pf6N2E2_4254 at 4951.297 kb on - strand, within Pf6N2E2_4254 at 4951.297 kb on - strand, within Pf6N2E2_4254 at 4951.315 kb on - strand, within Pf6N2E2_4254 at 4952.040 kb on + strand at 4952.040 kb on + strand at 4952.040 kb on + strand at 4952.085 kb on + strand at 4952.085 kb on + strand at 4952.086 kb on - strand at 4952.086 kb on - strand at 4952.086 kb on - strand at 4952.138 kb on + strand, within Pf6N2E2_4255 at 4952.138 kb on + strand, within Pf6N2E2_4255 at 4952.676 kb on - strand, within Pf6N2E2_4255 at 4952.687 kb on + strand, within Pf6N2E2_4255 at 4952.687 kb on + strand, within Pf6N2E2_4255 at 4952.687 kb on + strand, within Pf6N2E2_4255 at 4952.688 kb on - strand, within Pf6N2E2_4255 at 4952.688 kb on - strand, within Pf6N2E2_4255 at 4952.688 kb on - strand, within Pf6N2E2_4255 at 4952.688 kb on - strand, within Pf6N2E2_4255 at 4952.908 kb on + strand, within Pf6N2E2_4255 at 4952.909 kb on - strand, within Pf6N2E2_4255 at 4952.917 kb on + strand, within Pf6N2E2_4255 at 4952.918 kb on - strand, within Pf6N2E2_4255 at 4952.918 kb on - strand, within Pf6N2E2_4255 at 4952.927 kb on + strand, within Pf6N2E2_4255 at 4952.927 kb on + strand, within Pf6N2E2_4255 at 4952.927 kb on + strand, within Pf6N2E2_4255 at 4952.927 kb on + strand, within Pf6N2E2_4255 at 4952.928 kb on - strand, within Pf6N2E2_4255 at 4952.928 kb on - strand, within Pf6N2E2_4255 at 4953.333 kb on + strand, within Pf6N2E2_4255 at 4953.751 kb on + strand at 4953.751 kb on + strand at 4953.752 kb on - strand at 4953.761 kb on - strand at 4953.768 kb on + strand at 4953.769 kb on - strand at 4953.769 kb on - strand at 4953.769 kb on - strand at 4953.774 kb on + strand at 4953.774 kb on + strand at 4953.774 kb on + strand at 4953.774 kb on + strand at 4953.775 kb on - strand at 4953.775 kb on - strand at 4953.775 kb on - strand at 4953.775 kb on - strand at 4953.775 kb on - strand at 4953.775 kb on - strand at 4953.775 kb on - strand at 4953.775 kb on - strand at 4953.775 kb on - strand at 4953.775 kb on - strand at 4953.778 kb on + strand at 4953.778 kb on + strand at 4953.779 kb on - strand at 4953.902 kb on + strand at 4953.902 kb on + strand at 4953.903 kb on - strand at 4953.903 kb on - strand at 4953.945 kb on - strand at 4953.955 kb on + strand at 4953.956 kb on - strand at 4953.982 kb on + strand at 4953.982 kb on + strand at 4954.027 kb on - strand at 4954.071 kb on + strand at 4954.072 kb on - strand at 4954.195 kb on - strand at 4954.355 kb on + strand, within Pf6N2E2_4256 at 4954.356 kb on - strand, within Pf6N2E2_4256 at 4954.356 kb on - strand, within Pf6N2E2_4256 at 4954.356 kb on - strand, within Pf6N2E2_4256 at 4954.356 kb on - strand, within Pf6N2E2_4256 at 4954.361 kb on + strand, within Pf6N2E2_4256 at 4954.361 kb on + strand, within Pf6N2E2_4256 at 4954.361 kb on + strand, within Pf6N2E2_4256 at 4954.361 kb on + strand, within Pf6N2E2_4256 at 4954.362 kb on - strand, within Pf6N2E2_4256 at 4954.382 kb on + strand, within Pf6N2E2_4256 at 4954.382 kb on + strand, within Pf6N2E2_4256 at 4954.382 kb on + strand, within Pf6N2E2_4256 at 4954.382 kb on + strand, within Pf6N2E2_4256 at 4954.382 kb on + strand, within Pf6N2E2_4256 at 4954.382 kb on + strand, within Pf6N2E2_4256 at 4954.383 kb on - strand, within Pf6N2E2_4256 at 4954.389 kb on + strand, within Pf6N2E2_4256 at 4954.390 kb on - strand, within Pf6N2E2_4256 at 4954.390 kb on - strand, within Pf6N2E2_4256 at 4954.390 kb on - strand, within Pf6N2E2_4256 at 4954.390 kb on - strand at 4954.390 kb on - strand, within Pf6N2E2_4256 at 4954.390 kb on - strand, within Pf6N2E2_4256 at 4954.390 kb on - strand, within Pf6N2E2_4256 at 4954.412 kb on + strand, within Pf6N2E2_4256 at 4954.412 kb on + strand, within Pf6N2E2_4256 at 4954.413 kb on - strand, within Pf6N2E2_4256 at 4954.500 kb on + strand, within Pf6N2E2_4256 at 4954.500 kb on + strand, within Pf6N2E2_4256 at 4954.500 kb on + strand, within Pf6N2E2_4256 at 4954.514 kb on + strand, within Pf6N2E2_4256 at 4954.514 kb on + strand, within Pf6N2E2_4256 at 4954.515 kb on - strand, within Pf6N2E2_4256 at 4954.515 kb on - strand, within Pf6N2E2_4256 at 4954.556 kb on + strand, within Pf6N2E2_4256 at 4954.595 kb on - strand, within Pf6N2E2_4256 at 4954.683 kb on - strand, within Pf6N2E2_4256 at 4954.732 kb on + strand, within Pf6N2E2_4256 at 4954.732 kb on + strand, within Pf6N2E2_4256 at 4954.732 kb on + strand, within Pf6N2E2_4256 at 4954.732 kb on + strand, within Pf6N2E2_4256 at 4954.732 kb on + strand, within Pf6N2E2_4256 at 4954.733 kb on - strand, within Pf6N2E2_4256
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 4,950,957 + +0.3 4,950,958 - -0.7 4,951,245 + Pf6N2E2_4254 0.35 -0.8 4,951,246 - Pf6N2E2_4254 0.35 +0.1 4,951,249 + Pf6N2E2_4254 0.35 -0.4 4,951,249 + Pf6N2E2_4254 0.35 +0.6 4,951,250 - Pf6N2E2_4254 0.35 -0.7 4,951,250 - Pf6N2E2_4254 0.35 -0.8 4,951,296 + Pf6N2E2_4254 0.40 +0.8 4,951,297 - Pf6N2E2_4254 0.40 -0.8 4,951,297 - Pf6N2E2_4254 0.40 +0.9 4,951,315 - Pf6N2E2_4254 0.41 -0.1 4,952,040 + -0.3 4,952,040 + +0.4 4,952,040 + +0.1 4,952,085 + -0.1 4,952,085 + -0.7 4,952,086 - -0.3 4,952,086 - -0.2 4,952,086 - +0.5 4,952,138 + Pf6N2E2_4255 0.11 +0.8 4,952,138 + Pf6N2E2_4255 0.11 +1.2 4,952,676 - Pf6N2E2_4255 0.39 -0.2 4,952,687 + Pf6N2E2_4255 0.40 -0.8 4,952,687 + Pf6N2E2_4255 0.40 -0.4 4,952,687 + Pf6N2E2_4255 0.40 +0.1 4,952,688 - Pf6N2E2_4255 0.40 -0.0 4,952,688 - Pf6N2E2_4255 0.40 +0.4 4,952,688 - Pf6N2E2_4255 0.40 -0.4 4,952,688 - Pf6N2E2_4255 0.40 +0.1 4,952,908 + Pf6N2E2_4255 0.51 -0.5 4,952,909 - Pf6N2E2_4255 0.51 -0.4 4,952,917 + Pf6N2E2_4255 0.52 +0.1 4,952,918 - Pf6N2E2_4255 0.52 -0.3 4,952,918 - Pf6N2E2_4255 0.52 +2.6 4,952,927 + Pf6N2E2_4255 0.52 -0.1 4,952,927 + Pf6N2E2_4255 0.52 -0.2 4,952,927 + Pf6N2E2_4255 0.52 -0.6 4,952,927 + Pf6N2E2_4255 0.52 +0.1 4,952,928 - Pf6N2E2_4255 0.52 -0.1 4,952,928 - Pf6N2E2_4255 0.52 -0.9 4,953,333 + Pf6N2E2_4255 0.73 +0.5 4,953,751 + +1.1 4,953,751 + -0.4 4,953,752 - +0.2 4,953,761 - +0.6 4,953,768 + +0.3 4,953,769 - -0.1 4,953,769 - +0.5 4,953,769 - +0.2 4,953,774 + +1.6 4,953,774 + +0.2 4,953,774 + +0.3 4,953,774 + +0.1 4,953,775 - +0.3 4,953,775 - +0.0 4,953,775 - +0.2 4,953,775 - -0.7 4,953,775 - +0.2 4,953,775 - -0.5 4,953,775 - +0.2 4,953,775 - -0.0 4,953,775 - -0.5 4,953,775 - +0.2 4,953,778 + +1.6 4,953,778 + +0.0 4,953,779 - -0.1 4,953,902 + +0.3 4,953,902 + +0.1 4,953,903 - +0.7 4,953,903 - -0.4 4,953,945 - +0.0 4,953,955 + +0.2 4,953,956 - -0.1 4,953,982 + +0.2 4,953,982 + -0.4 4,954,027 - -0.6 4,954,071 + +0.3 4,954,072 - -0.3 4,954,195 - +0.2 4,954,355 + Pf6N2E2_4256 0.19 -0.7 4,954,356 - Pf6N2E2_4256 0.19 +0.3 4,954,356 - Pf6N2E2_4256 0.19 -1.6 4,954,356 - Pf6N2E2_4256 0.19 +0.6 4,954,356 - Pf6N2E2_4256 0.19 -0.0 4,954,361 + Pf6N2E2_4256 0.19 +0.9 4,954,361 + Pf6N2E2_4256 0.19 +0.4 4,954,361 + Pf6N2E2_4256 0.19 +0.2 4,954,361 + Pf6N2E2_4256 0.19 -0.1 4,954,362 - Pf6N2E2_4256 0.19 -0.0 4,954,382 + Pf6N2E2_4256 0.21 +0.3 4,954,382 + Pf6N2E2_4256 0.21 -0.4 4,954,382 + Pf6N2E2_4256 0.21 +0.3 4,954,382 + Pf6N2E2_4256 0.21 +0.3 4,954,382 + Pf6N2E2_4256 0.21 +0.8 4,954,382 + Pf6N2E2_4256 0.21 +0.8 4,954,383 - Pf6N2E2_4256 0.21 +0.2 4,954,389 + Pf6N2E2_4256 0.22 +0.1 4,954,390 - Pf6N2E2_4256 0.22 -0.6 4,954,390 - Pf6N2E2_4256 0.22 -0.0 4,954,390 - Pf6N2E2_4256 0.22 -0.1 4,954,390 - +1.1 4,954,390 - Pf6N2E2_4256 0.22 +0.1 4,954,390 - Pf6N2E2_4256 0.22 +0.7 4,954,390 - Pf6N2E2_4256 0.22 -0.4 4,954,412 + Pf6N2E2_4256 0.24 +0.3 4,954,412 + Pf6N2E2_4256 0.24 +0.9 4,954,413 - Pf6N2E2_4256 0.24 +0.8 4,954,500 + Pf6N2E2_4256 0.32 -0.6 4,954,500 + Pf6N2E2_4256 0.32 +0.1 4,954,500 + Pf6N2E2_4256 0.32 +0.5 4,954,514 + Pf6N2E2_4256 0.34 +0.1 4,954,514 + Pf6N2E2_4256 0.34 +0.3 4,954,515 - Pf6N2E2_4256 0.34 +0.5 4,954,515 - Pf6N2E2_4256 0.34 -0.3 4,954,556 + Pf6N2E2_4256 0.38 -0.2 4,954,595 - Pf6N2E2_4256 0.41 +0.7 4,954,683 - Pf6N2E2_4256 0.50 -0.8 4,954,732 + Pf6N2E2_4256 0.54 -1.5 4,954,732 + Pf6N2E2_4256 0.54 -0.0 4,954,732 + Pf6N2E2_4256 0.54 +0.8 4,954,732 + Pf6N2E2_4256 0.54 -0.6 4,954,732 + Pf6N2E2_4256 0.54 +0.6 4,954,733 - Pf6N2E2_4256 0.54 +0.1
Or see this region's nucleotide sequence