Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4152 and Pf6N2E2_4153 are separated by 10 nucleotides Pf6N2E2_4153 and Pf6N2E2_4154 are separated by 19 nucleotides
Pf6N2E2_4152 - alginate biosynthesis transcriptional regulatory protein AlgB, at 4,831,625 to 4,832,971
_4152
Pf6N2E2_4153 - Sensory box histidine kinase, at 4,832,982 to 4,834,772
_4153
Pf6N2E2_4154 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 4,834,792 to 4,836,297
_4154
Position (kb) 4832
4833
4834
4835 Strain fitness (log2 ratio) -2
-1
0
1 at 4832.001 kb on + strand, within Pf6N2E2_4152 at 4832.001 kb on + strand, within Pf6N2E2_4152 at 4832.002 kb on - strand, within Pf6N2E2_4152 at 4832.314 kb on + strand, within Pf6N2E2_4152 at 4832.315 kb on - strand, within Pf6N2E2_4152 at 4832.426 kb on + strand, within Pf6N2E2_4152 at 4832.427 kb on - strand, within Pf6N2E2_4152 at 4832.466 kb on + strand, within Pf6N2E2_4152 at 4832.643 kb on - strand, within Pf6N2E2_4152 at 4832.643 kb on - strand, within Pf6N2E2_4152 at 4832.691 kb on + strand, within Pf6N2E2_4152 at 4832.691 kb on + strand, within Pf6N2E2_4152 at 4832.691 kb on + strand, within Pf6N2E2_4152 at 4832.691 kb on + strand, within Pf6N2E2_4152 at 4832.692 kb on - strand, within Pf6N2E2_4152 at 4832.692 kb on - strand, within Pf6N2E2_4152 at 4832.692 kb on - strand, within Pf6N2E2_4152 at 4832.960 kb on + strand at 4832.960 kb on + strand at 4832.960 kb on + strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.981 kb on + strand at 4832.981 kb on + strand at 4832.981 kb on + strand at 4832.981 kb on + strand at 4832.982 kb on - strand at 4832.982 kb on - strand at 4833.023 kb on + strand at 4833.024 kb on - strand at 4833.235 kb on - strand, within Pf6N2E2_4153 at 4833.318 kb on + strand, within Pf6N2E2_4153 at 4833.592 kb on + strand at 4833.592 kb on + strand, within Pf6N2E2_4153 at 4834.752 kb on + strand at 4834.752 kb on + strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.923 kb on - strand at 4834.923 kb on - strand at 4834.923 kb on - strand at 4834.923 kb on - strand at 4834.995 kb on + strand, within Pf6N2E2_4154 at 4834.995 kb on + strand, within Pf6N2E2_4154 at 4834.995 kb on + strand, within Pf6N2E2_4154 at 4834.996 kb on - strand, within Pf6N2E2_4154 at 4835.091 kb on - strand, within Pf6N2E2_4154 at 4835.091 kb on - strand, within Pf6N2E2_4154 at 4835.274 kb on + strand, within Pf6N2E2_4154 at 4835.275 kb on - strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.497 kb on - strand, within Pf6N2E2_4154 at 4835.497 kb on - strand, within Pf6N2E2_4154 at 4835.517 kb on + strand, within Pf6N2E2_4154 at 4835.518 kb on - strand, within Pf6N2E2_4154 at 4835.518 kb on - strand, within Pf6N2E2_4154 at 4835.518 kb on - strand, within Pf6N2E2_4154 at 4835.676 kb on + strand, within Pf6N2E2_4154 at 4835.676 kb on + strand, within Pf6N2E2_4154 at 4835.676 kb on + strand, within Pf6N2E2_4154 at 4835.677 kb on - strand, within Pf6N2E2_4154 at 4835.677 kb on - strand, within Pf6N2E2_4154 at 4835.711 kb on + strand, within Pf6N2E2_4154 at 4835.712 kb on - strand, within Pf6N2E2_4154 at 4835.712 kb on - strand, within Pf6N2E2_4154 at 4835.738 kb on + strand, within Pf6N2E2_4154 at 4835.739 kb on - strand, within Pf6N2E2_4154
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 4,832,001 + Pf6N2E2_4152 0.28 -0.2 4,832,001 + Pf6N2E2_4152 0.28 -0.3 4,832,002 - Pf6N2E2_4152 0.28 -0.3 4,832,314 + Pf6N2E2_4152 0.51 -1.1 4,832,315 - Pf6N2E2_4152 0.51 +1.2 4,832,426 + Pf6N2E2_4152 0.59 +0.1 4,832,427 - Pf6N2E2_4152 0.60 +0.6 4,832,466 + Pf6N2E2_4152 0.62 -0.3 4,832,643 - Pf6N2E2_4152 0.76 -0.4 4,832,643 - Pf6N2E2_4152 0.76 +0.7 4,832,691 + Pf6N2E2_4152 0.79 +0.5 4,832,691 + Pf6N2E2_4152 0.79 -0.1 4,832,691 + Pf6N2E2_4152 0.79 +0.7 4,832,691 + Pf6N2E2_4152 0.79 +0.3 4,832,692 - Pf6N2E2_4152 0.79 +0.3 4,832,692 - Pf6N2E2_4152 0.79 +0.4 4,832,692 - Pf6N2E2_4152 0.79 -0.0 4,832,960 + -0.3 4,832,960 + -1.0 4,832,960 + -0.2 4,832,961 - -0.1 4,832,961 - -0.8 4,832,961 - -1.2 4,832,961 - +0.1 4,832,961 - +0.1 4,832,961 - -0.9 4,832,961 - +0.3 4,832,961 - -0.3 4,832,981 + +0.0 4,832,981 + -0.9 4,832,981 + +0.5 4,832,981 + -0.5 4,832,982 - -1.1 4,832,982 - +0.8 4,833,023 + +0.4 4,833,024 - +0.7 4,833,235 - Pf6N2E2_4153 0.14 +1.6 4,833,318 + Pf6N2E2_4153 0.19 -0.0 4,833,592 + -0.0 4,833,592 + Pf6N2E2_4153 0.34 -0.7 4,834,752 + -1.8 4,834,752 + -1.9 4,834,922 + +0.2 4,834,922 + +0.0 4,834,922 + +0.4 4,834,922 + +0.9 4,834,922 + -0.0 4,834,922 + +0.7 4,834,923 - -0.9 4,834,923 - -0.4 4,834,923 - -0.8 4,834,923 - +0.3 4,834,995 + Pf6N2E2_4154 0.13 +0.3 4,834,995 + Pf6N2E2_4154 0.13 -0.6 4,834,995 + Pf6N2E2_4154 0.13 -1.8 4,834,996 - Pf6N2E2_4154 0.14 -0.1 4,835,091 - Pf6N2E2_4154 0.20 +0.7 4,835,091 - Pf6N2E2_4154 0.20 -0.3 4,835,274 + Pf6N2E2_4154 0.32 +0.6 4,835,275 - Pf6N2E2_4154 0.32 +1.0 4,835,316 + Pf6N2E2_4154 0.35 +0.7 4,835,316 + Pf6N2E2_4154 0.35 +0.2 4,835,316 + Pf6N2E2_4154 0.35 -0.4 4,835,316 + Pf6N2E2_4154 0.35 +0.5 4,835,316 + Pf6N2E2_4154 0.35 +0.6 4,835,316 + Pf6N2E2_4154 0.35 +0.8 4,835,316 + Pf6N2E2_4154 0.35 +0.2 4,835,317 - Pf6N2E2_4154 0.35 -0.1 4,835,317 - Pf6N2E2_4154 0.35 +0.2 4,835,317 - Pf6N2E2_4154 0.35 +1.4 4,835,317 - Pf6N2E2_4154 0.35 +0.5 4,835,317 - Pf6N2E2_4154 0.35 +0.1 4,835,317 - Pf6N2E2_4154 0.35 +0.3 4,835,317 - Pf6N2E2_4154 0.35 +0.2 4,835,317 - Pf6N2E2_4154 0.35 -0.4 4,835,317 - Pf6N2E2_4154 0.35 +0.1 4,835,317 - Pf6N2E2_4154 0.35 +0.2 4,835,317 - Pf6N2E2_4154 0.35 +0.6 4,835,318 + Pf6N2E2_4154 0.35 -1.3 4,835,318 + Pf6N2E2_4154 0.35 -0.9 4,835,318 + Pf6N2E2_4154 0.35 +1.4 4,835,318 + Pf6N2E2_4154 0.35 -0.7 4,835,318 + Pf6N2E2_4154 0.35 -1.3 4,835,318 + Pf6N2E2_4154 0.35 +0.5 4,835,318 + Pf6N2E2_4154 0.35 +0.6 4,835,318 + Pf6N2E2_4154 0.35 -0.6 4,835,318 + Pf6N2E2_4154 0.35 +0.5 4,835,318 + Pf6N2E2_4154 0.35 +0.3 4,835,318 + Pf6N2E2_4154 0.35 +0.7 4,835,318 + Pf6N2E2_4154 0.35 -0.3 4,835,318 + Pf6N2E2_4154 0.35 +0.7 4,835,318 + Pf6N2E2_4154 0.35 -1.3 4,835,318 + Pf6N2E2_4154 0.35 +0.1 4,835,318 + Pf6N2E2_4154 0.35 +0.7 4,835,318 + Pf6N2E2_4154 0.35 -0.4 4,835,318 + Pf6N2E2_4154 0.35 +0.3 4,835,318 + Pf6N2E2_4154 0.35 +0.5 4,835,318 + Pf6N2E2_4154 0.35 -0.4 4,835,319 - Pf6N2E2_4154 0.35 +0.5 4,835,319 - Pf6N2E2_4154 0.35 +0.3 4,835,319 - Pf6N2E2_4154 0.35 +0.1 4,835,319 - Pf6N2E2_4154 0.35 +0.3 4,835,319 - Pf6N2E2_4154 0.35 -0.5 4,835,319 - Pf6N2E2_4154 0.35 +0.3 4,835,319 - Pf6N2E2_4154 0.35 -1.1 4,835,319 - Pf6N2E2_4154 0.35 +1.4 4,835,319 - Pf6N2E2_4154 0.35 +0.2 4,835,319 - Pf6N2E2_4154 0.35 -0.3 4,835,319 - Pf6N2E2_4154 0.35 +0.2 4,835,319 - Pf6N2E2_4154 0.35 +0.2 4,835,319 - Pf6N2E2_4154 0.35 -0.8 4,835,319 - Pf6N2E2_4154 0.35 +0.7 4,835,319 - Pf6N2E2_4154 0.35 -0.7 4,835,319 - Pf6N2E2_4154 0.35 +0.9 4,835,319 - Pf6N2E2_4154 0.35 -0.4 4,835,496 + Pf6N2E2_4154 0.47 -0.2 4,835,496 + Pf6N2E2_4154 0.47 -1.0 4,835,496 + Pf6N2E2_4154 0.47 +0.2 4,835,496 + Pf6N2E2_4154 0.47 -0.2 4,835,496 + Pf6N2E2_4154 0.47 +0.2 4,835,496 + Pf6N2E2_4154 0.47 +0.7 4,835,497 - Pf6N2E2_4154 0.47 -0.3 4,835,497 - Pf6N2E2_4154 0.47 +0.7 4,835,517 + Pf6N2E2_4154 0.48 +0.2 4,835,518 - Pf6N2E2_4154 0.48 +1.4 4,835,518 - Pf6N2E2_4154 0.48 +0.2 4,835,518 - Pf6N2E2_4154 0.48 -0.2 4,835,676 + Pf6N2E2_4154 0.59 +0.5 4,835,676 + Pf6N2E2_4154 0.59 +0.7 4,835,676 + Pf6N2E2_4154 0.59 +0.4 4,835,677 - Pf6N2E2_4154 0.59 -0.1 4,835,677 - Pf6N2E2_4154 0.59 -0.5 4,835,711 + Pf6N2E2_4154 0.61 -0.0 4,835,712 - Pf6N2E2_4154 0.61 -0.4 4,835,712 - Pf6N2E2_4154 0.61 -0.2 4,835,738 + Pf6N2E2_4154 0.63 +0.3 4,835,739 - Pf6N2E2_4154 0.63 +0.3
Or see this region's nucleotide sequence