Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3832 and Pf6N2E2_3833 are separated by 177 nucleotides Pf6N2E2_3833 and Pf6N2E2_3834 overlap by 45 nucleotides
Pf6N2E2_3832 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1), at 4,465,261 to 4,466,760
_3832
Pf6N2E2_3833 - hypothetical protein, at 4,466,938 to 4,467,123
_3833
Pf6N2E2_3834 - Lipoprotein NlpD, at 4,467,079 to 4,468,371
_3834
Position (kb)
4466
4467
4468 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4466.769 kb on + strand at 4466.770 kb on - strand at 4466.770 kb on - strand at 4466.770 kb on - strand at 4466.770 kb on - strand at 4466.880 kb on + strand at 4467.042 kb on + strand, within Pf6N2E2_3833 at 4467.042 kb on + strand, within Pf6N2E2_3833 at 4467.043 kb on - strand, within Pf6N2E2_3833 at 4467.043 kb on - strand, within Pf6N2E2_3833 at 4467.045 kb on + strand, within Pf6N2E2_3833 at 4467.045 kb on + strand, within Pf6N2E2_3833 at 4467.046 kb on - strand, within Pf6N2E2_3833 at 4467.046 kb on - strand, within Pf6N2E2_3833 at 4467.046 kb on - strand, within Pf6N2E2_3833 at 4467.046 kb on - strand, within Pf6N2E2_3833 at 4467.046 kb on - strand, within Pf6N2E2_3833 at 4467.078 kb on + strand, within Pf6N2E2_3833 at 4467.079 kb on - strand at 4467.079 kb on - strand at 4467.440 kb on - strand, within Pf6N2E2_3834 at 4467.440 kb on - strand, within Pf6N2E2_3834 at 4467.496 kb on + strand, within Pf6N2E2_3834 at 4467.497 kb on - strand, within Pf6N2E2_3834 at 4467.497 kb on - strand, within Pf6N2E2_3834 at 4467.499 kb on + strand, within Pf6N2E2_3834 at 4467.499 kb on + strand, within Pf6N2E2_3834 at 4467.500 kb on - strand, within Pf6N2E2_3834 at 4467.500 kb on - strand, within Pf6N2E2_3834 at 4468.016 kb on + strand, within Pf6N2E2_3834 at 4468.016 kb on + strand, within Pf6N2E2_3834 at 4468.016 kb on + strand, within Pf6N2E2_3834 at 4468.016 kb on + strand, within Pf6N2E2_3834 at 4468.019 kb on + strand, within Pf6N2E2_3834 at 4468.020 kb on - strand, within Pf6N2E2_3834
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 4,466,769 + -0.5 4,466,770 - -0.3 4,466,770 - -0.7 4,466,770 - +0.5 4,466,770 - -0.1 4,466,880 + +0.4 4,467,042 + Pf6N2E2_3833 0.56 +0.4 4,467,042 + Pf6N2E2_3833 0.56 -0.0 4,467,043 - Pf6N2E2_3833 0.56 -0.5 4,467,043 - Pf6N2E2_3833 0.56 -0.9 4,467,045 + Pf6N2E2_3833 0.58 -0.8 4,467,045 + Pf6N2E2_3833 0.58 -1.9 4,467,046 - Pf6N2E2_3833 0.58 -0.9 4,467,046 - Pf6N2E2_3833 0.58 -0.3 4,467,046 - Pf6N2E2_3833 0.58 -0.4 4,467,046 - Pf6N2E2_3833 0.58 -1.3 4,467,046 - Pf6N2E2_3833 0.58 -1.5 4,467,078 + Pf6N2E2_3833 0.75 -1.5 4,467,079 - -1.2 4,467,079 - -1.1 4,467,440 - Pf6N2E2_3834 0.28 -0.5 4,467,440 - Pf6N2E2_3834 0.28 -2.5 4,467,496 + Pf6N2E2_3834 0.32 -2.8 4,467,497 - Pf6N2E2_3834 0.32 -2.1 4,467,497 - Pf6N2E2_3834 0.32 -1.2 4,467,499 + Pf6N2E2_3834 0.32 -2.8 4,467,499 + Pf6N2E2_3834 0.32 -4.4 4,467,500 - Pf6N2E2_3834 0.33 -0.6 4,467,500 - Pf6N2E2_3834 0.33 -0.7 4,468,016 + Pf6N2E2_3834 0.72 -2.4 4,468,016 + Pf6N2E2_3834 0.72 -1.5 4,468,016 + Pf6N2E2_3834 0.72 -3.9 4,468,016 + Pf6N2E2_3834 0.72 -2.3 4,468,019 + Pf6N2E2_3834 0.73 -1.9 4,468,020 - Pf6N2E2_3834 0.73 -0.1
Or see this region's nucleotide sequence