Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3715 and Pf6N2E2_3716 are separated by 146 nucleotides Pf6N2E2_3716 and Pf6N2E2_3717 overlap by 4 nucleotides Pf6N2E2_3717 and Pf6N2E2_3718 overlap by 14 nucleotides
Pf6N2E2_3715 - FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase / (3R)-hydroxymyristoyl-[ACP] dehydratase (EC 4.2.1.-), at 4,327,782 to 4,329,461
_3715
Pf6N2E2_3716 - FIG143263: Glycosyl transferase, at 4,329,608 to 4,330,342
_3716
Pf6N2E2_3717 - Lysophospholipid acyltransferase, at 4,330,339 to 4,331,283
_3717
Pf6N2E2_3718 - Putative histidine ammonia-lyase protein, at 4,331,270 to 4,332,808
_3718
Position (kb)
4329
4330
4331 Strain fitness (log2 ratio)
-2
-1
0
1 at 4328.695 kb on - strand, within Pf6N2E2_3715 at 4328.764 kb on + strand, within Pf6N2E2_3715 at 4328.794 kb on + strand, within Pf6N2E2_3715 at 4328.794 kb on + strand, within Pf6N2E2_3715 at 4328.795 kb on - strand, within Pf6N2E2_3715 at 4328.795 kb on - strand, within Pf6N2E2_3715 at 4328.795 kb on - strand, within Pf6N2E2_3715 at 4329.390 kb on + strand at 4329.391 kb on - strand at 4329.391 kb on - strand at 4329.439 kb on + strand at 4329.439 kb on + strand at 4329.440 kb on - strand at 4329.440 kb on - strand at 4329.440 kb on - strand at 4329.440 kb on - strand at 4329.459 kb on + strand at 4329.460 kb on - strand at 4329.528 kb on + strand at 4329.528 kb on + strand at 4329.529 kb on - strand at 4329.639 kb on - strand at 4329.639 kb on - strand at 4329.966 kb on - strand, within Pf6N2E2_3716 at 4329.996 kb on - strand, within Pf6N2E2_3716 at 4329.996 kb on - strand, within Pf6N2E2_3716 at 4330.038 kb on + strand, within Pf6N2E2_3716 at 4330.038 kb on + strand, within Pf6N2E2_3716 at 4330.039 kb on - strand, within Pf6N2E2_3716 at 4330.434 kb on - strand, within Pf6N2E2_3717 at 4330.477 kb on + strand, within Pf6N2E2_3717 at 4330.477 kb on + strand, within Pf6N2E2_3717 at 4330.477 kb on + strand, within Pf6N2E2_3717 at 4330.478 kb on - strand, within Pf6N2E2_3717 at 4330.478 kb on - strand, within Pf6N2E2_3717 at 4330.478 kb on - strand, within Pf6N2E2_3717 at 4330.478 kb on - strand, within Pf6N2E2_3717 at 4330.478 kb on - strand, within Pf6N2E2_3717 at 4330.478 kb on - strand, within Pf6N2E2_3717 at 4330.478 kb on - strand, within Pf6N2E2_3717 at 4330.522 kb on + strand, within Pf6N2E2_3717 at 4330.522 kb on + strand, within Pf6N2E2_3717 at 4331.209 kb on + strand at 4331.209 kb on + strand at 4331.209 kb on + strand at 4331.209 kb on + strand at 4331.209 kb on + strand at 4331.210 kb on - strand at 4331.210 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 4,328,695 - Pf6N2E2_3715 0.54 +0.1 4,328,764 + Pf6N2E2_3715 0.58 +0.4 4,328,794 + Pf6N2E2_3715 0.60 -0.2 4,328,794 + Pf6N2E2_3715 0.60 +0.3 4,328,795 - Pf6N2E2_3715 0.60 +0.1 4,328,795 - Pf6N2E2_3715 0.60 -0.0 4,328,795 - Pf6N2E2_3715 0.60 -0.2 4,329,390 + -1.4 4,329,391 - -0.3 4,329,391 - +0.5 4,329,439 + +0.2 4,329,439 + +0.8 4,329,440 - -0.2 4,329,440 - +0.7 4,329,440 - -0.3 4,329,440 - -0.9 4,329,459 + +0.4 4,329,460 - -0.0 4,329,528 + -1.3 4,329,528 + -1.4 4,329,529 - -1.8 4,329,639 - -0.6 4,329,639 - +0.2 4,329,966 - Pf6N2E2_3716 0.49 -1.4 4,329,996 - Pf6N2E2_3716 0.53 -0.6 4,329,996 - Pf6N2E2_3716 0.53 +0.8 4,330,038 + Pf6N2E2_3716 0.59 -0.1 4,330,038 + Pf6N2E2_3716 0.59 -0.3 4,330,039 - Pf6N2E2_3716 0.59 -0.5 4,330,434 - Pf6N2E2_3717 0.10 -1.8 4,330,477 + Pf6N2E2_3717 0.15 -0.0 4,330,477 + Pf6N2E2_3717 0.15 -0.9 4,330,477 + Pf6N2E2_3717 0.15 +0.2 4,330,478 - Pf6N2E2_3717 0.15 +0.3 4,330,478 - Pf6N2E2_3717 0.15 -0.1 4,330,478 - Pf6N2E2_3717 0.15 -0.7 4,330,478 - Pf6N2E2_3717 0.15 +0.5 4,330,478 - Pf6N2E2_3717 0.15 -0.2 4,330,478 - Pf6N2E2_3717 0.15 -0.3 4,330,478 - Pf6N2E2_3717 0.15 -0.1 4,330,522 + Pf6N2E2_3717 0.19 +0.5 4,330,522 + Pf6N2E2_3717 0.19 -1.0 4,331,209 + +0.4 4,331,209 + +1.1 4,331,209 + +0.6 4,331,209 + -0.1 4,331,209 + -0.4 4,331,210 - -0.4 4,331,210 - -1.4
Or see this region's nucleotide sequence