Experiment: Benzethonium chloride 0.02 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3686 and Pf6N2E2_3687 are separated by 213 nucleotides Pf6N2E2_3687 and Pf6N2E2_3688 overlap by 4 nucleotides Pf6N2E2_3688 and Pf6N2E2_3689 are separated by 273 nucleotides
Pf6N2E2_3686 - Acyl-CoA dehydrogenase (EC 1.3.8.7), at 4,299,305 to 4,301,107
_3686
Pf6N2E2_3687 - FIG00959437: hypothetical protein, at 4,301,321 to 4,301,623
_3687
Pf6N2E2_3688 - ATPase involved in DNA repair, at 4,301,620 to 4,301,850
_3688
Pf6N2E2_3689 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 4,302,124 to 4,303,734
_3689
Position (kb)
4301
4302 Strain fitness (log2 ratio)
-2
-1
0
1 at 4300.373 kb on + strand, within Pf6N2E2_3686 at 4300.373 kb on + strand, within Pf6N2E2_3686 at 4300.374 kb on - strand, within Pf6N2E2_3686 at 4300.374 kb on - strand, within Pf6N2E2_3686 at 4300.581 kb on - strand, within Pf6N2E2_3686 at 4300.877 kb on + strand, within Pf6N2E2_3686 at 4300.897 kb on + strand, within Pf6N2E2_3686 at 4300.898 kb on - strand, within Pf6N2E2_3686 at 4300.982 kb on + strand at 4300.982 kb on + strand at 4300.982 kb on + strand at 4300.982 kb on + strand at 4300.982 kb on + strand at 4300.983 kb on - strand at 4300.983 kb on - strand at 4300.983 kb on - strand at 4300.983 kb on - strand at 4300.983 kb on - strand at 4300.983 kb on - strand at 4300.983 kb on - strand at 4300.983 kb on - strand at 4300.983 kb on - strand at 4300.983 kb on - strand at 4300.984 kb on + strand at 4300.985 kb on - strand at 4300.985 kb on - strand at 4301.074 kb on + strand at 4301.074 kb on + strand at 4301.074 kb on + strand at 4301.074 kb on + strand at 4301.074 kb on + strand at 4301.074 kb on + strand at 4301.074 kb on + strand at 4301.074 kb on + strand at 4301.074 kb on + strand at 4301.074 kb on + strand at 4301.075 kb on - strand at 4301.075 kb on - strand at 4301.075 kb on - strand at 4301.571 kb on + strand, within Pf6N2E2_3687 at 4301.572 kb on - strand, within Pf6N2E2_3687 at 4301.572 kb on - strand, within Pf6N2E2_3687 at 4301.850 kb on + strand at 4301.917 kb on - strand at 4301.947 kb on - strand at 4302.036 kb on + strand at 4302.036 kb on + strand at 4302.042 kb on + strand at 4302.043 kb on - strand at 4302.092 kb on + strand at 4302.092 kb on + strand at 4302.092 kb on + strand at 4302.093 kb on - strand at 4302.093 kb on - strand at 4302.093 kb on - strand at 4302.093 kb on - strand at 4302.116 kb on + strand at 4302.116 kb on + strand at 4302.117 kb on - strand at 4302.117 kb on - strand at 4302.120 kb on + strand at 4302.120 kb on + strand at 4302.120 kb on + strand at 4302.120 kb on + strand at 4302.120 kb on + strand at 4302.121 kb on - strand at 4302.121 kb on - strand at 4302.121 kb on - strand at 4302.121 kb on - strand at 4302.123 kb on + strand at 4302.123 kb on + strand at 4302.123 kb on + strand at 4302.123 kb on + strand at 4302.124 kb on - strand at 4302.124 kb on - strand at 4302.124 kb on - strand at 4302.192 kb on - strand at 4302.362 kb on - strand, within Pf6N2E2_3689 at 4302.362 kb on - strand, within Pf6N2E2_3689 at 4302.413 kb on - strand, within Pf6N2E2_3689 at 4302.451 kb on + strand, within Pf6N2E2_3689 at 4302.451 kb on + strand, within Pf6N2E2_3689 at 4302.522 kb on + strand, within Pf6N2E2_3689
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.02 mM remove 4,300,373 + Pf6N2E2_3686 0.59 +1.6 4,300,373 + Pf6N2E2_3686 0.59 -0.6 4,300,374 - Pf6N2E2_3686 0.59 -0.4 4,300,374 - Pf6N2E2_3686 0.59 -0.3 4,300,581 - Pf6N2E2_3686 0.71 +1.2 4,300,877 + Pf6N2E2_3686 0.87 +0.3 4,300,897 + Pf6N2E2_3686 0.88 -1.3 4,300,898 - Pf6N2E2_3686 0.88 -0.7 4,300,982 + -0.2 4,300,982 + -0.4 4,300,982 + +0.8 4,300,982 + -0.2 4,300,982 + +0.4 4,300,983 - +0.6 4,300,983 - +0.2 4,300,983 - -0.6 4,300,983 - -1.3 4,300,983 - -0.8 4,300,983 - +0.2 4,300,983 - +0.7 4,300,983 - +0.8 4,300,983 - -1.1 4,300,983 - +0.8 4,300,984 + -0.2 4,300,985 - -0.9 4,300,985 - +1.0 4,301,074 + +0.2 4,301,074 + +0.1 4,301,074 + -0.8 4,301,074 + -0.5 4,301,074 + -0.0 4,301,074 + -0.7 4,301,074 + +0.6 4,301,074 + +0.8 4,301,074 + +1.4 4,301,074 + +0.1 4,301,075 - +0.4 4,301,075 - -0.5 4,301,075 - +1.0 4,301,571 + Pf6N2E2_3687 0.83 -0.2 4,301,572 - Pf6N2E2_3687 0.83 -1.4 4,301,572 - Pf6N2E2_3687 0.83 +0.5 4,301,850 + +1.4 4,301,917 - -0.3 4,301,947 - +0.7 4,302,036 + -0.4 4,302,036 + +0.2 4,302,042 + +1.2 4,302,043 - +0.6 4,302,092 + -0.1 4,302,092 + +0.5 4,302,092 + -0.1 4,302,093 - +0.1 4,302,093 - -0.7 4,302,093 - +0.5 4,302,093 - -1.3 4,302,116 + -1.8 4,302,116 + +0.9 4,302,117 - +0.1 4,302,117 - +1.4 4,302,120 + -0.4 4,302,120 + -0.4 4,302,120 + -1.0 4,302,120 + -0.7 4,302,120 + -1.1 4,302,121 - +0.5 4,302,121 - +0.6 4,302,121 - +0.1 4,302,121 - +0.4 4,302,123 + -1.0 4,302,123 + +0.8 4,302,123 + -0.5 4,302,123 + +0.8 4,302,124 - +0.3 4,302,124 - -0.0 4,302,124 - +0.4 4,302,192 - +0.5 4,302,362 - Pf6N2E2_3689 0.15 +0.5 4,302,362 - Pf6N2E2_3689 0.15 +0.6 4,302,413 - Pf6N2E2_3689 0.18 -0.8 4,302,451 + Pf6N2E2_3689 0.20 +0.4 4,302,451 + Pf6N2E2_3689 0.20 +0.6 4,302,522 + Pf6N2E2_3689 0.25 -0.3
Or see this region's nucleotide sequence